RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 PRKD1Q15139 912 aaPredicted RBP14.35□□□□□ -0.11
TUBE1-211ENST00000605457 AASDHQ4L235 1098 aaPredicted RBP14.35□□□□□ -0.11
TUBE1-211ENST00000605457 TMEM259Q4ZIN3 620 aa14.35□□□□□ -0.11
TUBE1-211ENST00000605457 AADACL2Q6P093 401 aa14.35□□□□□ -0.11
TUBE1-211ENST00000605457 BZW1Q7L1Q6 419 aaKnown RBP14.35□□□□□ -0.11
TUBE1-211ENST00000605457 TTC7BQ86TV6 843 aa14.35□□□□□ -0.11
TUBE1-211ENST00000605457 HORMAD1Q86X24 394 aa14.35□□□□□ -0.11
TUBE1-211ENST00000605457 SPOCK2Q92563 424 aa14.35□□□□□ -0.11
TUBE1-211ENST00000605457 P3H4Q92791 437 aa14.35□□□□□ -0.11
TUBE1-211ENST00000605457 IL12RB2Q99665 862 aa14.35□□□□□ -0.11
TUBE1-211ENST00000605457 HEMGNQ9BXL5 484 aa14.35□□□□□ -0.11
TUBE1-211ENST00000605457 BRD8Q9H0E9 1235 aa14.35□□□□□ -0.11
TUBE1-211ENST00000605457 NOD2Q9HC29 1040 aa14.35□□□□□ -0.11
TUBE1-211ENST00000605457 SCUBE2Q9NQ36 999 aa14.35□□□□□ -0.11
TUBE1-211ENST00000605457 RBM22Q9NW64 420 aaKnown RBP eCLIP14.35□□□□□ -0.11
TUBE1-211ENST00000605457 GGT7Q9UJ14 662 aa14.35□□□□□ -0.11
TUBE1-211ENST00000605457 ZFR2Q9UPR6 939 aaKnown RBP14.35□□□□□ -0.11
TUBE1-211ENST00000605457 ITM2BQ9Y287 266 aa14.35□□□□□ -0.11
TUBE1-211ENST00000605457 UPK3BL1B0FP48 263 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 PRR5-ARHGAP8B1AHC4 643 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 UPK3BL2E5RIL1 263 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 HTRA2O43464 458 aaPredicted RBP14.34□□□□□ -0.11
TUBE1-211ENST00000605457 TSPAN6O43657 245 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 GDF9O60383 454 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 SOCS5O75159 536 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 NUDT1P36639 197 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 SUOXP51687 545 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 AFF3P51826 1226 aaKnown RBP14.34□□□□□ -0.11
TUBE1-211ENST00000605457 ZBTB17Q13105 803 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 UGP2Q16851 508 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 ZNF284Q2VY69 593 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 SETMARQ53H47 684 aaPredicted RBP14.34□□□□□ -0.11
TUBE1-211ENST00000605457 CFAP58Q5T655 872 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 SEL1L3Q68CR1 1132 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 KIAA1161Q6NSJ0 714 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 HAUS1Q96CS2 278 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 SLC6A18Q96N87 628 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 SEMA3CQ99985 751 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 EDEM2Q9BV94 578 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 FSCN3Q9NQT6 498 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 ATP8A1Q9Y2Q0 1164 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 TTLL3Q9Y4R7 772 aa14.34□□□□□ -0.11
TUBE1-211ENST00000605457 TDRD6O60522 2096 aaKnown RBP14.34□□□□□ -0.11
TUBE1-211ENST00000605457 PTMAP06454 111 aaKnown RBP14.33□□□□□ -0.11
TUBE1-211ENST00000605457 ENGP17813 658 aa14.33□□□□□ -0.11
TUBE1-211ENST00000605457 GRIA4P48058 902 aa14.33□□□□□ -0.11
TUBE1-211ENST00000605457 RPS21P63220 83 aaKnown RBP14.33□□□□□ -0.11
TUBE1-211ENST00000605457 RACK1P63244 317 aaKnown RBP14.33□□□□□ -0.11
TUBE1-211ENST00000605457 TRAF2Q12933 501 aa14.33□□□□□ -0.11
TUBE1-211ENST00000605457 PRPF39Q86UA1 669 aaKnown RBP14.33□□□□□ -0.11
TUBE1-211ENST00000605457 CNTD1Q8N815 330 aa14.33□□□□□ -0.11
TUBE1-211ENST00000605457 UBE2Q2Q8WVN8 375 aa14.33□□□□□ -0.11
TUBE1-211ENST00000605457 FEM1CQ96JP0 617 aa14.33□□□□□ -0.11
TUBE1-211ENST00000605457 SERAC1Q96JX3 654 aa14.33□□□□□ -0.11
TUBE1-211ENST00000605457 HAUS2Q9NVX0 235 aa14.33□□□□□ -0.11
TUBE1-211ENST00000605457 DMTF1Q9Y222 760 aa14.33□□□□□ -0.11
TUBE1-211ENST00000605457 PCDHGC4Q9Y5F7 938 aa14.33□□□□□ -0.11
TUBE1-211ENST00000605457 NEMP1O14524 444 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 ARHGAP33O14559 1287 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 NEBLO76041 1014 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 JCHAINP01591 159 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 PRLRP16471 622 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 ITIH2P19823 946 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 MMP12P39900 470 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 CETN2P41208 172 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 CSNK1EP49674 416 aaKnown RBP14.33□□□□□ -0.12
TUBE1-211ENST00000605457 ARHGAP8P85298 464 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 DSC2Q02487 901 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 ITKQ08881 620 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 ELP6Q0PNE2 266 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 GRIK2Q13002 908 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 ZNF211Q13398 564 aaPredicted RBP14.33□□□□□ -0.12
TUBE1-211ENST00000605457 IHHQ14623 411 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 NOMO1Q15155 1222 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 NAPEPLDQ6IQ20 393 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 LAYNQ6UX15 382 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 B4GALNT4Q76KP1 1039 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 ZC3H18Q86VM9 953 aaKnown RBP14.33□□□□□ -0.12
TUBE1-211ENST00000605457 ZSCAN30Q86W11 494 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 ARRDC2Q8TBH0 407 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 TFB1MQ8WVM0 346 aaKnown RBP14.33□□□□□ -0.12
TUBE1-211ENST00000605457 KLK6Q92876 244 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 QKIQ96PU8 341 aaKnown RBP eCLIP14.33□□□□□ -0.123e-11■■■■□ 23.1
TUBE1-211ENST00000605457 ALS2CR12Q96Q35 445 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 CEP41Q9BYV8 373 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 PCDH12Q9NPG4 1184 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 SPTBN2O15020 2390 aa14.33□□□□□ -0.12
TUBE1-211ENST00000605457 PCNX2A6NKB5 2137 aa14.32□□□□□ -0.12
TUBE1-211ENST00000605457 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.32□□□□□ -0.12
TUBE1-211ENST00000605457 RIOK3O14730 519 aaKnown RBP14.32□□□□□ -0.12
TUBE1-211ENST00000605457 WNT9AO14904 365 aa14.32□□□□□ -0.12
TUBE1-211ENST00000605457 TJP3O95049 919 aa14.32□□□□□ -0.12
TUBE1-211ENST00000605457 XPAP23025 273 aaPredicted RBP14.32□□□□□ -0.12
TUBE1-211ENST00000605457 CES1P23141 567 aa14.32□□□□□ -0.12
TUBE1-211ENST00000605457 LIMK1P53667 647 aa14.32□□□□□ -0.12
TUBE1-211ENST00000605457 BNC1Q01954 994 aa14.32□□□□□ -0.12
TUBE1-211ENST00000605457 NIPAL4Q0D2K0 466 aa14.32□□□□□ -0.12
TUBE1-211ENST00000605457 FGL2Q14314 439 aa14.32□□□□□ -0.12
TUBE1-211ENST00000605457 FAM182AQ5T1J6 154 aa14.32□□□□□ -0.12
TUBE1-211ENST00000605457 MEI1Q5TIA1 1274 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms