RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 THSD1Q9NS62 852 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 LHX3Q9UBR4 397 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 UBA2Q9UBT2 640 aaPredicted RBP13.3□□□□□ -0.28
RPS28-204ENST00000602140 LIMA1Q9UHB6 759 aaKnown RBP13.3□□□□□ -0.28
RPS28-204ENST00000602140 SATB2Q9UPW6 733 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 COQ6Q9Y2Z9 468 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 ENTPD2Q9Y5L3 495 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 PTPRQQ9UMZ3 2332 aa13.3□□□□□ -0.28
RPS28-204ENST00000602140 A0A1W2PNU3 283 aaPredicted RBP13.29□□□□□ -0.28
RPS28-204ENST00000602140 TOR1BO14657 336 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 CASC3O15234 703 aaKnown RBP13.29□□□□□ -0.28
RPS28-204ENST00000602140 YY2O15391 372 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 C1QL1O75973 258 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 CELA2BP08218 269 aaPredicted RBP13.29□□□□□ -0.28
RPS28-204ENST00000602140 AIF1P55008 147 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 MYL5Q02045 173 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 PPARDQ03181 441 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 LRRC14Q15048 493 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 IRF4Q15306 451 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 TMEM52BQ4KMG9 183 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 BROXQ5VW32 411 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 DCUN1D2Q6PH85 259 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 RBM44Q6ZP01 1051 aaKnown RBP13.29□□□□□ -0.28
RPS28-204ENST00000602140 CLEC17AQ6ZS10 378 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 RBM43Q6ZSC3 357 aaKnown RBP13.29□□□□□ -0.28
RPS28-204ENST00000602140 DNAAF5Q86Y56 855 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 KCNE4Q8WWG9 221 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 GRAMD1AQ96CP6 724 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 VCPIP1Q96JH7 1222 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 SUV39H2Q9H5I1 410 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 MGAQ8IWI9 3026 aa13.29□□□□□ -0.28
RPS28-204ENST00000602140 COL27A1Q8IZC6 1860 aaPredicted RBP13.28□□□□□ -0.28
RPS28-204ENST00000602140 J3KR12 359 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 FGF10O15520 208 aaPredicted RBP13.28□□□□□ -0.28
RPS28-204ENST00000602140 KLK10O43240 276 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 TCEA3O75764 348 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 C6P13671 934 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 CDK11BP21127 795 aaKnown RBP13.28□□□□□ -0.28
RPS28-204ENST00000602140 RBMS1P29558 406 aaKnown RBP13.28□□□□□ -0.28
RPS28-204ENST00000602140 BLKP51451 505 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 SUOXP51687 545 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 TMPRSS3P57727 454 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 TPI1P60174 286 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 OGDHQ02218 1023 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 ELP6Q0PNE2 266 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 TCEA2Q15560 299 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 UGP2Q16851 508 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 WSCD2Q2TBF2 565 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 ACAD10Q6JQN1 1059 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 ESRP1Q6NXG1 681 aaKnown RBP13.28□□□□□ -0.28
RPS28-204ENST00000602140 FOXR1Q6PIV2 292 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 SASS6Q6UVJ0 657 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 HID1Q8IV36 788 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 MCOLN2Q8IZK6 566 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 LSM14AQ8ND56 463 aaKnown RBP13.28□□□□□ -0.28
RPS28-204ENST00000602140 HCAR2Q8TDS4 363 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 NAT6Q93015 286 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 TSACCQ96A04 125 aaPredicted RBP13.28□□□□□ -0.28
RPS28-204ENST00000602140 CELF6Q96J87 481 aaKnown RBP13.28□□□□□ -0.28
RPS28-204ENST00000602140 SLC46A1Q96NT5 459 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 ERGIC2Q96RQ1 377 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 CCDC3Q9BQI4 270 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 LRRC19Q9H756 370 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 SYNDIG1Q9H7V2 258 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 PDFQ9HBH1 243 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 CPNE5Q9HCH3 593 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 PCDH12Q9NPG4 1184 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 ANO10Q9NW15 660 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 GPATCH2LQ9NWQ4 482 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 GULP1Q9UBP9 304 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 PADI4Q9UM07 663 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 DOLKQ9UPQ8 538 aa13.28□□□□□ -0.28
RPS28-204ENST00000602140 TSPAN11A1L157 253 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 LRRC10BA6NIK2 292 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 TMEM110-MUSTN1A8MSY1 372 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 BUB1BO60566 1050 aaPredicted RBP13.27□□□□□ -0.29
RPS28-204ENST00000602140 PRAMEF11O60813 436 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 CTSEP14091 401 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 FERP16591 822 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 DESP17661 470 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 LIG3P49916 1009 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 PEX5P50542 639 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 HK3P52790 923 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 NDST2P52849 883 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 UCNP55089 124 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 SPIDRQ14159 915 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 INPP5AQ14642 412 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 GRM3Q14832 879 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 ELOCQ15369 112 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 ALG11Q2TAA5 492 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 CFAP58Q5T655 872 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 ARHGAP40Q5TG30 622 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 IGF2-ASQ6U949 168 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 PCSK4Q6UW60 755 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 ENPP7Q6UWV6 458 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 RD3Q7Z3Z2 195 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 CAMK1DQ8IU85 385 aa13.27□□□□□ -0.29
RPS28-204ENST00000602140 FSTL5Q8N475 847 aaPredicted RBP13.27□□□□□ -0.29
RPS28-204ENST00000602140 WDR48Q8TAF3 677 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms