RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 SAMD15Q9P1V8 674 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 A0A087WUV0 522 aaPredicted RBP17.61■□□□□ 0.41
DDX49-213ENST00000602113 LOC730098B7Z3J9 87 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 WASH3PC4AMC7 463 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 HTRA2O43464 458 aaPredicted RBP17.61■□□□□ 0.41
DDX49-213ENST00000602113 PGLSO95336 258 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 PRKCGP05129 697 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 BCL2L1Q07817 233 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 ZNF844Q08AG5 666 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 PREPLQ4J6C6 727 aaPredicted RBP17.61■□□□□ 0.41
DDX49-213ENST00000602113 PCID2Q5JVF3 399 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 EMC10Q5UCC4 262 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 EGFLAMQ63HQ2 1017 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 LPCAT1Q8NF37 534 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 FBF1Q8TES7 1133 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 DNASE1L2Q92874 299 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 FCRL3Q96P31 734 aaPredicted RBP17.61■□□□□ 0.41
DDX49-213ENST00000602113 TUBGCP5Q96RT8 1024 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 NAT9Q9BTE0 207 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 KIFC1Q9BW19 673 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 CPEB1Q9BZB8 566 aaKnown RBP17.61■□□□□ 0.41
DDX49-213ENST00000602113 TMEM245Q9H330 911 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 ZDHHC6Q9H6R6 413 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 ATP13A3Q9H7F0 1226 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 ZDHHC4Q9NPG8 344 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 THAP10Q9P2Z0 257 aaPredicted RBP17.61■□□□□ 0.41
DDX49-213ENST00000602113 SOX13Q9UN79 622 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 SLC8A2Q9UPR5 921 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 PCDHB9Q9Y5E1 797 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 PIAS3Q9Y6X2 628 aa17.61■□□□□ 0.41
DDX49-213ENST00000602113 TCRBV9S1A1TA0A576 114 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 MAGEB16A2A368 324 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 K7EQS6 105 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 SOCS5O75159 536 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 PIRTP0C851 137 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 ALADP13716 330 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 HLA-EP13747 358 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 CRYMQ14894 314 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 QPCTQ16769 361 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 ARMC12Q5T9G4 340 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 TMEM135Q86UB9 458 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 RALGPS2Q86X27 583 aaPredicted RBP17.6■□□□□ 0.41
DDX49-213ENST00000602113 CCNJLQ8IV13 435 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 UCMAQ8WVF2 138 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 RMDN1Q96DB5 314 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 ZNF778Q96MU6 729 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 ACOX2Q99424 681 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 ADGRE3Q9BY15 652 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 RABGEF1Q9UJ41 708 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 FAM50BQ9Y247 325 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 TCAF1Q9Y4C2 921 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 SPO11Q9Y5K1 396 aa17.6■□□□□ 0.41
DDX49-213ENST00000602113 FAM237BA0A1B0GVD1 139 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 C1QAP02745 245 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 GSTA2P09210 222 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 CA4P22748 312 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 ADRA1DP25100 572 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 NMBRP28336 390 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 SERPINA4P29622 427 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 SLC8A1P32418 973 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 PHBP35232 272 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 RECQLP46063 649 aaPredicted RBP17.59■□□□□ 0.41
DDX49-213ENST00000602113 PTPRRQ15256 657 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 HNRNPA1L2Q32P51 320 aaKnown RBP17.59■□□□□ 0.41
DDX49-213ENST00000602113 ANKRD20A4Q4UJ75 823 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 PKN3Q6P5Z2 889 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 TRMT10BQ6PF06 316 aaKnown RBP17.59■□□□□ 0.41
DDX49-213ENST00000602113 ZSWIM9Q86XI8 627 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 SUGP1Q8IWZ8 645 aaKnown RBP17.59■□□□□ 0.41
DDX49-213ENST00000602113 UNC5BQ8IZJ1 945 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 PPHLN1Q8NEY8 458 aaKnown RBP17.59■□□□□ 0.41
DDX49-213ENST00000602113 GSDMBQ8TAX9 411 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 PIH1D2Q8WWB5 315 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 RANBP9Q96S59 729 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 HEPHQ9BQS7 1158 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 C8orf33Q9H7E9 229 aaPredicted RBP17.59■□□□□ 0.41
DDX49-213ENST00000602113 STARD13Q9Y3M8 1113 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 RPS6KL1Q9Y6S9 549 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 WASF2Q9Y6W5 498 aa17.59■□□□□ 0.41
DDX49-213ENST00000602113 ZCWPW2A0A1B0GU75 182 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 CCDC78A2IDD5 438 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 ANKRD66B4E2M5 251 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 SPAG6O75602 509 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 PIAS1O75925 651 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 POLBP06746 335 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 CTSLP07711 333 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 CHRM1P11229 460 aaPredicted RBP17.58■□□□□ 0.41
DDX49-213ENST00000602113 PRKCHP24723 683 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 IL12RB1P42701 662 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 TNFRSF4P43489 277 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 EIF3BP55884 814 aaKnown RBP17.58■□□□□ 0.41
DDX49-213ENST00000602113 RAD51Q06609 339 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 IFFO1Q0D2I5 559 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 TDGQ13569 410 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 SEPT6Q14141 434 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 EFTUD2Q15029 972 aaKnown RBP eCLIP17.58■□□□□ 0.415e-7■■■■■ 47.1
DDX49-213ENST00000602113 PON2Q15165 354 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 C9orf64Q5T6V5 341 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 SERPINA13PQ6UXR4 307 aa17.58■□□□□ 0.41
DDX49-213ENST00000602113 NUDT18Q6ZVK8 323 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms