RNA–Protein interactions for RNA: ENST00000601763.1

CCDC61-208, Transcript of coiled-coil domain containing 61, humanhuman

TSL 3

Gene CCDC61, Length 291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-208ENST00000601763 NAPEPLDQ6IQ20 393 aa16.21■□□□□ 0.19
CCDC61-208ENST00000601763 PRPF39Q86UA1 669 aaKnown RBP16.21■□□□□ 0.19
CCDC61-208ENST00000601763 SPATS2Q86XZ4 545 aaKnown RBP16.21■□□□□ 0.19
CCDC61-208ENST00000601763 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.21■□□□□ 0.19
CCDC61-208ENST00000601763 HDAC11Q96DB2 347 aa16.21■□□□□ 0.19
CCDC61-208ENST00000601763 ECHDC3Q96DC8 303 aa16.21■□□□□ 0.19
CCDC61-208ENST00000601763 NUDCD1Q96RS6 583 aa16.21■□□□□ 0.19
CCDC61-208ENST00000601763 PCDH12Q9NPG4 1184 aa16.21■□□□□ 0.19
CCDC61-208ENST00000601763 RBM22Q9NW64 420 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCDC61-208ENST00000601763 PCDHA3Q9Y5H8 950 aa16.21■□□□□ 0.19
CCDC61-208ENST00000601763 TRPM6Q9BX84 2022 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 GOLGA8CPA6NN73 597 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 GOLGA6L6A8MZA4 724 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 UPK3BL1B0FP48 263 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 UPK3BL2E5RIL1 263 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 GIPC1O14908 333 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 DDX3YO15523 660 aaKnown RBP16.2■□□□□ 0.18
CCDC61-208ENST00000601763 ZRANB2O95218 330 aaKnown RBP eCLIP16.2■□□□□ 0.18
CCDC61-208ENST00000601763 JCHAINP01591 159 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 PYGMP11217 842 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 CTNNA2P26232 953 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 CD38P28907 300 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 CTSKP43235 329 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 GRIA4P48058 902 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 BCL2L1Q07817 233 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 PPIDQ08752 370 aaKnown RBP16.2■□□□□ 0.18
CCDC61-208ENST00000601763 ZNF211Q13398 564 aaPredicted RBP16.2■□□□□ 0.18
CCDC61-208ENST00000601763 HNRNPDQ14103 355 aaKnown RBP16.2■□□□□ 0.18
CCDC61-208ENST00000601763 UGP2Q16851 508 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 TPRG1LQ5T0D9 272 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 GCNT7Q6ZNI0 430 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 VSIG1Q86XK7 387 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 CCDC50Q8IVM0 306 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 CCDC13Q8IYE1 715 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 RCOR2Q8IZ40 523 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 TMEM145Q8NBT3 493 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 EXD1Q8NHP7 514 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 ARRDC2Q8TBH0 407 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 CAMK1GQ96NX5 476 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 TUBGCP5Q96RT8 1024 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 KLF6Q99612 283 aaPredicted RBP16.2■□□□□ 0.18
CCDC61-208ENST00000601763 SEMA3CQ99985 751 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 FAM118BQ9BPY3 351 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 C1QTNF2Q9BXJ5 285 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 MAK16Q9BXY0 300 aaKnown RBP16.2■□□□□ 0.18
CCDC61-208ENST00000601763 GAREM1Q9H706 876 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 ATP13A3Q9H7F0 1226 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 SCUBE2Q9NQ36 999 aa16.2■□□□□ 0.18
CCDC61-208ENST00000601763 POM121BA6NF01 834 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 NEMP1O14524 444 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 VILLO15195 856 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 FOXD2O60548 495 aaPredicted RBP16.19■□□□□ 0.18
CCDC61-208ENST00000601763 PDHA1P08559 390 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 CD59P13987 128 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 SERPINA4P29622 427 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 RENBPP51606 427 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 AP1S1P61966 158 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 IL9RQ01113 521 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 ITKQ08881 620 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 AP1B1Q10567 949 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 RALGDSQ12967 914 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 SHBQ15464 509 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 SETMARQ53H47 684 aaPredicted RBP16.19■□□□□ 0.18
CCDC61-208ENST00000601763 TFDP3Q5H9I0 405 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 NEK5Q6P3R8 708 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 NYAP1Q6ZVC0 841 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 RABEPKQ7Z6M1 372 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 LRRC49Q8IUZ0 686 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 OR13H1Q8NG92 308 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 PDCD6IPQ8WUM4 868 aaKnown RBP16.19■□□□□ 0.18
CCDC61-208ENST00000601763 FEM1CQ96JP0 617 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 BMFQ96LC9 184 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 ZNF641Q96N77 438 aaPredicted RBP16.19■□□□□ 0.18
CCDC61-208ENST00000601763 IL12RB2Q99665 862 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 SLC17A9Q9BYT1 436 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 GUCA1BQ9UMX6 200 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 TTLL3Q9Y4R7 772 aa16.19■□□□□ 0.18
CCDC61-208ENST00000601763 RIOK3O14730 519 aaKnown RBP16.18■□□□□ 0.18
CCDC61-208ENST00000601763 ARHGAP6O43182 974 aa16.18■□□□□ 0.18
CCDC61-208ENST00000601763 HTRA2O43464 458 aaPredicted RBP16.18■□□□□ 0.18
CCDC61-208ENST00000601763 TSPAN6O43657 245 aa16.18■□□□□ 0.18
CCDC61-208ENST00000601763 SYPP08247 313 aa16.18■□□□□ 0.18
CCDC61-208ENST00000601763 MMP2P08253 660 aa16.18■□□□□ 0.18
CCDC61-208ENST00000601763 GM2AP17900 193 aa16.18■□□□□ 0.18
CCDC61-208ENST00000601763 MMP12P39900 470 aa16.18■□□□□ 0.18
CCDC61-208ENST00000601763 ATXN3P54252 364 aaPredicted RBP16.18■□□□□ 0.18
CCDC61-208ENST00000601763 RPS21P63220 83 aaKnown RBP16.18■□□□□ 0.18
CCDC61-208ENST00000601763 PRKD1Q15139 912 aaPredicted RBP16.18■□□□□ 0.18
CCDC61-208ENST00000601763 TMEM52BQ4KMG9 183 aa16.18■□□□□ 0.18
CCDC61-208ENST00000601763 ODF2Q5BJF6 829 aa16.18■□□□□ 0.18
CCDC61-208ENST00000601763 ADAT2Q7Z6V5 191 aaKnown RBP16.18■□□□□ 0.18
CCDC61-208ENST00000601763 NSMCE1Q8WV22 266 aa16.18■□□□□ 0.18
CCDC61-208ENST00000601763 FATE1Q969F0 183 aa16.18■□□□□ 0.18
CCDC61-208ENST00000601763 FUBP1Q96AE4 644 aaKnown RBP16.18■□□□□ 0.18
CCDC61-208ENST00000601763 RAB7BQ96AH8 199 aa16.18■□□□□ 0.18
CCDC61-208ENST00000601763 ZNF830Q96NB3 372 aaPredicted RBP16.18■□□□□ 0.18
CCDC61-208ENST00000601763 RTKNQ9BST9 563 aa16.18■□□□□ 0.18
CCDC61-208ENST00000601763 LZTFL1Q9NQ48 299 aa16.18■□□□□ 0.18
CCDC61-208ENST00000601763 MBNL1Q9NR56 388 aaKnown RBP16.18■□□□□ 0.18
CCDC61-208ENST00000601763 DNAAF2Q9NVR5 837 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms