RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 HMGXB4Q9UGU5 601 aa11.15□□□□□ -0.62
ZNF558-207ENST00000601372 PITPNM1O00562 1244 aa11.15□□□□□ -0.63
ZNF558-207ENST00000601372 GUCA1CO95843 209 aa11.15□□□□□ -0.63
ZNF558-207ENST00000601372 CCNB1P14635 433 aa11.15□□□□□ -0.63
ZNF558-207ENST00000601372 NRF1Q16656 503 aa11.15□□□□□ -0.63
ZNF558-207ENST00000601372 METTL3Q86U44 580 aaKnown RBP11.15□□□□□ -0.63
ZNF558-207ENST00000601372 SCAMP5Q8TAC9 235 aa11.15□□□□□ -0.63
ZNF558-207ENST00000601372 SNRNP27Q8WVK2 155 aaKnown RBP11.15□□□□□ -0.63
ZNF558-207ENST00000601372 MPP4Q96JB8 637 aa11.15□□□□□ -0.63
ZNF558-207ENST00000601372 RUBCNLQ9H714 662 aa11.15□□□□□ -0.63
ZNF558-207ENST00000601372 STAU1O95793 577 aaKnown RBP11.14□□□□□ -0.63
ZNF558-207ENST00000601372 ANPEPP15144 967 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 ZNF23P17027 643 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 ATXN1P54253 815 aaKnown RBP11.14□□□□□ -0.63
ZNF558-207ENST00000601372 USP4Q13107 963 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 RNASEH2BQ5TBB1 312 aaKnown RBP11.14□□□□□ -0.63
ZNF558-207ENST00000601372 TXNRD3NBQ6F5E7 133 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 CERS2Q96G23 380 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 ZNF184Q99676 751 aaPredicted RBP11.14□□□□□ -0.63
ZNF558-207ENST00000601372 EBNA1BP2Q99848 306 aaKnown RBP11.14□□□□□ -0.63
ZNF558-207ENST00000601372 TELO2Q9Y4R8 837 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 TACR2P21452 398 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 MSX2P35548 267 aaPredicted RBP11.14□□□□□ -0.63
ZNF558-207ENST00000601372 NET1Q7Z628 596 aaPredicted RBP11.14□□□□□ -0.63
ZNF558-207ENST00000601372 ZNF280BQ86YH2 543 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 SLC4A11Q8NBS3 891 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 PLEKHO2Q8TD55 490 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 KCTD4Q8WVF5 259 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 PLD4Q96BZ4 506 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 KXD1Q9BQD3 176 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 ASB3Q9Y575 518 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 UGT1A9O60656 530 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 ITGA2BP08514 1039 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 PTPN3P26045 913 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 ASPAP45381 313 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 NPY2RP49146 381 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 DGKGP49619 791 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 WASHC5Q12768 1159 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 DDX39BQ13838 428 aaKnown RBP11.14□□□□□ -0.63
ZNF558-207ENST00000601372 GALNT3Q14435 633 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 C2orf27AQ580R0 203 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 MTSS1LQ765P7 747 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 UGT1A7Q9HAW7 530 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 UGT1A10Q9HAW8 530 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 UGT1A8Q9HAW9 530 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 MAGEB16A2A368 324 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 PRR5-ARHGAP8B1AHC4 643 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 PEX1O43933 1283 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 GRIA4P48058 902 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 ARHGAP8P85298 464 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 PPM1JQ5JR12 505 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 CDCA2Q69YH5 1023 aaPredicted RBP11.14□□□□□ -0.63
ZNF558-207ENST00000601372 SLC39A4Q6P5W5 647 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 CMTR2Q8IYT2 770 aaKnown RBP11.14□□□□□ -0.63
ZNF558-207ENST00000601372 FBXL18Q96ME1 805 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 THUMPD3Q9BV44 507 aaKnown RBP11.14□□□□□ -0.63
ZNF558-207ENST00000601372 ASPSCR1Q9BZE9 553 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 TNKS2Q9H2K2 1166 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 AGO1Q9UL18 857 aaKnown RBP11.14□□□□□ -0.63
ZNF558-207ENST00000601372 E9PAM4 449 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 BNIP1Q12981 228 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 PGS1Q32NB8 556 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 CCDC185Q8N715 623 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 IGSF21Q96ID5 467 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 HNRNPABQ99729 332 aaKnown RBP11.14□□□□□ -0.63
ZNF558-207ENST00000601372 ECSITQ9BQ95 431 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 MID1IP1Q9NPA3 183 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 GIMAP4Q9NUV9 329 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 SCHIP1Q9P0W5 487 aaPredicted RBP11.14□□□□□ -0.63
ZNF558-207ENST00000601372 ADAMTS5Q9UNA0 930 aa11.14□□□□□ -0.63
ZNF558-207ENST00000601372 STBD1O95210 358 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 FKBP9O95302 570 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 CLPTM1O96005 669 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 PCCBP05166 539 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 FOXN2P32314 431 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 NOMO1Q15155 1222 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 PMF1Q6P1K2 205 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 LINGO4Q6UY18 593 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 RNF19BQ6ZMZ0 732 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 FKBP9P1Q75LS8 142 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 KCTD14Q9BQ13 255 aaPredicted RBP11.13□□□□□ -0.63
ZNF558-207ENST00000601372 NTPCRQ9BSD7 190 aaKnown RBP11.13□□□□□ -0.63
ZNF558-207ENST00000601372 ABCG4Q9H172 646 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 LHX5Q9H2C1 402 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 ARHGEF4Q9NR80 690 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 DDX18Q9NVP1 670 aaKnown RBP11.13□□□□□ -0.63
ZNF558-207ENST00000601372 SOHLH2Q9NX45 425 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 CLUHO75153 1309 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 E7ENQ6 273 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 PPEF2O14830 753 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 GALTP07902 379 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 ELFN1P0C7U0 828 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 DGKEP52429 567 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 SOWAHAQ2M3V2 549 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 PIWIL2Q8TC59 973 aaKnown RBP11.13□□□□□ -0.63
ZNF558-207ENST00000601372 IRGQQ8WZA9 623 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 SEPHS2Q99611 448 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 SLC17A6Q9P2U8 582 aa11.13□□□□□ -0.63
ZNF558-207ENST00000601372 GNEQ9Y223 722 aaKnown RBP11.13□□□□□ -0.63
ZNF558-207ENST00000601372 CLASP2O75122 1294 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms