RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	BCAT1	P54687	386 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	VBP1	P61758	197 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	BST2	Q10589	180 aa	Known RBP	11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.43	□□□□□ -0.58	8e-8	■■□□□ 14.4
SUPT5H-216	ENST00000599335	TRIM16L	Q309B1	348 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	IYD	Q6PHW0	289 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	CCDC28A	Q8IWP9	274 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	C12orf76	Q8N812	135 aa	Predicted RBP	11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	IFT22	Q9H7X7	185 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	MOCS1	Q9NZB8	636 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	AP4E1	Q9UPM8	1137 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	C5orf42	Q9H799	3197 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	RAB19	A4D1S5	217 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	LRRC37A2	A6NM11	1700 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	IDH3B	O43837	385 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	KRT36	O76013	467 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	IGHA2	P01877	340 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	ABCB1	P08183	1280 aa	Predicted RBP	11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	HMBS	P08397	361 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	RPA3	P35244	121 aa	Predicted RBP	11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	COPA	P53621	1224 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	GPR85	P60893	370 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	ADIG	Q0VDE8	80 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	NR1H3	Q13133	447 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	TICAM1	Q8IUC6	712 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	11.43	□□□□□ -0.58	8e-6	■■■■■ 46.4
SUPT5H-216	ENST00000599335	LILRB4	Q8NHJ6	448 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	SPOCK2	Q92563	424 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	MAML1	Q92585	1016 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	MCUR1	Q96AQ8	359 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	TNIP3	Q96KP6	325 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	CEP41	Q9BYV8	373 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	TRIM8	Q9BZR9	551 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	C12orf65	Q9H3J6	166 aa	Known RBP	11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	IGSF5	Q9NSI5	407 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	TXLNG	Q9NUQ3	528 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	ARL2BP	Q9Y2Y0	163 aa		11.43	□□□□□ -0.58
SUPT5H-216	ENST00000599335	OR6B1	O95007	311 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	PFKM	P08237	780 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	AMPD1	P23109	780 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	GABRB2	P47870	512 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	NKX2-5	P52952	324 aa	Predicted RBP	11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	YWHAH	Q04917	246 aa	Predicted RBP	11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	FCHO2	Q0JRZ9	810 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	AGMO	Q6ZNB7	445 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	PIGW	Q7Z7B1	504 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	TRABD2A	Q86V40	505 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	COLGALT2	Q8IYK4	626 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	TDH	Q8IZJ6	230 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	NUP93	Q8N1F7	819 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	CARNMT1	Q8N4J0	409 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	DEFB123	Q8N688	67 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	PLD5	Q8N7P1	536 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	ATAD1	Q8NBU5	361 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	CKAP2	Q8WWK9	683 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	COG8	Q96MW5	612 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	SLC38A7	Q9NVC3	462 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	PIH1D1	Q9NWS0	290 aa	Known RBP	11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	EP300	Q09472	2414 aa	Predicted RBP	11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	FUOM	A2VDF0	154 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	PGM3	O95394	542 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	LYN	P07948	512 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	ABHD2	P08910	425 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	PTPN7	P35236	360 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	PDK2	Q15119	407 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	NOMO1	Q15155	1222 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	HEATR6	Q6AI08	1181 aa	Known RBP	11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	OVOS1	Q6IE37	1185 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	ANKRD33	Q7Z3H0	272 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	ADAM32	Q8TC27	787 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	POF1B	Q8WVV4	589 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	SENP8	Q96LD8	212 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	CITED4	Q96RK1	184 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	ZNF717	Q9BY31	904 aa	Predicted RBP	11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	PAK5	Q9P286	719 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	CDY1	Q9Y6F8	540 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	PRR23A	A6NEV1	266 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	NRP1	O14786	923 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	SSX5	O60225	188 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	GNAZ	P19086	355 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	ITGAL	P20701	1170 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	CDK7	P50613	346 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	CSNK2B	P67870	215 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	SV2C	Q496J9	727 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	HEATR4	Q86WZ0	1026 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	DEFB106A	Q8N104	65 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	LRRC52	Q8N7C0	313 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	SMG8	Q8ND04	991 aa	Known RBP	11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	PCDH19	Q8TAB3	1148 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	SLC35F5	Q8WV83	523 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	RAD9A	Q99638	391 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	SLCO1B3	Q9NPD5	702 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	TMEM161A	Q9NX61	479 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	SPG21	Q9NZD8	308 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	HSFX1	Q9UBD0	423 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	POLH	Q9Y253	713 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	SNX8	Q9Y5X2	465 aa		11.42	□□□□□ -0.58
SUPT5H-216	ENST00000599335	ESRRB	O95718	433 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms