RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 RETREG1Q9H6L5 497 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 PDFQ9HBH1 243 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 EVA1BQ9NVM1 165 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 SPASTQ9UBP0 616 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 RABGEF1Q9UJ41 708 aa14.84□□□□□ -0.03
IRF3-223ENST00000599223 AHCTF1Q8WYP5 2266 aa14.83□□□□□ -0.03
IRF3-223ENST00000599223 ZSCAN5CA6NGD5 496 aaPredicted RBP14.83□□□□□ -0.04
IRF3-223ENST00000599223 RASA4BC9J798 803 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 RASA4O43374 803 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 CREB3O43889 395 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 TM7SF2O76062 418 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 IGSF6O95976 241 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 PLA2G2AP14555 144 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 EIF4A3P38919 411 aaKnown RBP14.83□□□□□ -0.04
IRF3-223ENST00000599223 TMPRSS3P57727 454 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 SKOR1P84550 965 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 SERINC3Q13530 473 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 CYTH1Q15438 398 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 ALG11Q2TAA5 492 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 PPP1R15BQ5SWA1 713 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 ARHGAP40Q5TG30 622 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 RBM44Q6ZP01 1051 aaKnown RBP14.83□□□□□ -0.04
IRF3-223ENST00000599223 PCDH19Q8TAB3 1148 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 CXorf40AQ8TE69 158 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 TBATAQ96M53 351 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 NAT10Q9H0A0 1025 aaKnown RBP14.83□□□□□ -0.04
IRF3-223ENST00000599223 THSD1Q9NS62 852 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 FANCLQ9NW38 375 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 GPATCH2LQ9NWQ4 482 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 NCKIPSDQ9NZQ3 722 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 DKK3Q9UBP4 350 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 FZD10Q9ULW2 581 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 MFHAS1Q9Y4C4 1052 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 BOD1L1Q8NFC6 3051 aa14.83□□□□□ -0.04
IRF3-223ENST00000599223 PIEZO2Q9H5I5 2752 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 TSPAN11A1L157 253 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 CDRT15L2A8MXV6 281 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 YY2O15391 372 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 KLK10O43240 276 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 PRKCGP05129 697 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 C6P13671 934 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 STAT1P42224 750 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 RGRP47804 291 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 ZNF143P52747 638 aaPredicted RBP14.82□□□□□ -0.04
IRF3-223ENST00000599223 COPB1P53618 953 aaKnown RBP14.82□□□□□ -0.04
IRF3-223ENST00000599223 TYRO3Q06418 890 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 PTK2BQ14289 1009 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 STX1AQ16623 288 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 WSCD2Q2TBF2 565 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 CT47A1Q5JQC4 288 aaPredicted RBP14.82□□□□□ -0.04
IRF3-223ENST00000599223 EFHC2Q5JST6 749 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 DNAJC24Q6P3W2 148 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 SCYL2Q6P3W7 929 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 IGF2-ASQ6U949 168 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 B3GNT8Q7Z7M8 397 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 LSMEM2Q8N112 164 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 BTN2A2Q8WVV5 523 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 CCDC3Q9BQI4 270 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 SEMA4CQ9C0C4 833 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 LRRC19Q9H756 370 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 SYNDIG1Q9H7V2 258 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 PCDH12Q9NPG4 1184 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 ANO10Q9NW15 660 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 SIRPGQ9P1W8 387 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
IRF3-223ENST00000599223 SIGLEC16A6NMB1 481 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 LGALS16A8MUM7 142 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 WASH4PA8MWX3 477 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 J3KR12 359 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 ERVH48-1M5A8F1 160 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 CALB1P05937 261 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 ANXA6P08133 673 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 MMP12P39900 470 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 YPEL5P62699 121 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 PPARDQ03181 441 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 PARP15Q460N3 678 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 TMEM52BQ4KMG9 183 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 INO80DQ53TQ3 878 aaPredicted RBP14.81□□□□□ -0.04
IRF3-223ENST00000599223 FKBP15Q5T1M5 1219 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 FAXCQ5TGI0 409 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 APTXQ7Z2E3 356 aaKnown RBP14.81□□□□□ -0.04
IRF3-223ENST00000599223 UMODL1-AS1Q8N2C9 162 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 LSM14AQ8ND56 463 aaKnown RBP14.81□□□□□ -0.04
IRF3-223ENST00000599223 CASKIN2Q8WXE0 1202 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 NAT6Q93015 286 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 TSACCQ96A04 125 aaPredicted RBP14.81□□□□□ -0.04
IRF3-223ENST00000599223 PDXPQ96GD0 296 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 CELF6Q96J87 481 aaKnown RBP14.81□□□□□ -0.04
IRF3-223ENST00000599223 SLC46A1Q96NT5 459 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 SLC13A1Q9BZW2 595 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 HSD3B7Q9H2F3 369 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 SEPT11Q9NVA2 429 aaKnown RBP14.81□□□□□ -0.04
IRF3-223ENST00000599223 TAS2R14Q9NYV8 317 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 OR1A2Q9Y585 309 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 PCDHGA8Q9Y5G5 932 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 BSNQ9UPA5 3926 aa14.81□□□□□ -0.04
IRF3-223ENST00000599223 ARHGEF17Q96PE2 2063 aaPredicted RBP14.81□□□□□ -0.04
IRF3-223ENST00000599223 UNC13CQ8NB66 2214 aa14.8□□□□□ -0.04
IRF3-223ENST00000599223 NTN3O00634 580 aaPredicted RBP14.8□□□□□ -0.04
IRF3-223ENST00000599223 ATMINO43313 823 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms