RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 LZTFL1Q9NQ48 299 aa14.15□□□□□ -0.14
SHKBP1-218ENST00000598907 ABCC13Q9NSE7 274 aa14.15□□□□□ -0.14
SHKBP1-218ENST00000598907 TRMT1Q9NXH9 659 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-218ENST00000598907 STOML2Q9UJZ1 356 aa14.15□□□□□ -0.14
SHKBP1-218ENST00000598907 HBS1LQ9Y450 684 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-218ENST00000598907 FBN2P35556 2912 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 A0A1W2PQU0 124 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 A1L4Q6 167 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 GRAP2O75791 330 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 AGFG2O95081 481 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 NOS2P35228 1153 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 PTPN9P43378 593 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 ZNF143P52747 638 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 HNRNPKP61978 463 aaKnown RBP eCLIP14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 EIF4EBP2Q13542 120 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 CCDC14Q49A88 953 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 FSCBQ5H9T9 825 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 PIK3R6Q5UE93 754 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 SYPL2Q5VXT5 272 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 MSANTD2Q6P1R3 559 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 DCUN1D2Q6PH85 259 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 EMC1Q8N766 993 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 NIPA2Q8N8Q9 360 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 CENPIQ92674 756 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 FAM149B1Q96BN6 582 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 NPY6RQ99463 290 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 CCDC3Q9BQI4 270 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 ADNPQ9H2P0 1102 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 KDM4CQ9H3R0 1056 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 ZNF71Q9NQZ8 489 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 TMPRSS4Q9NRS4 437 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 RRN3Q9NYV6 651 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 NCKIPSDQ9NZQ3 722 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 LCMT1Q9UIC8 334 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 ANAPC2Q9UJX6 822 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 SARDHQ9UL12 918 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 GUCA1BQ9UMX6 200 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 NAALADL1Q9UQQ1 740 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 LRRK1Q38SD2 2015 aa14.14□□□□□ -0.15
SHKBP1-218ENST00000598907 EME2A4GXA9 379 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 H3BM21 787 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 SLC7A4O43246 635 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 BUB1O43683 1085 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 ENDOD1O94919 500 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 SRPRAP08240 638 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 JMJD7P0C870 316 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 PDGFRAP16234 1089 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 GPD1P21695 349 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 AKT2P31751 481 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 NOP2P46087 812 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 RNASE9P60153 205 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 RPS24P62847 133 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 ECT2LQ008S8 904 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 SLC25A52Q3SY17 297 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 FAM133BQ5BKY9 247 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 OTUD1Q5VV17 481 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 BORAQ6PGQ7 559 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 GCNT7Q6ZNI0 430 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 SLFN11Q7Z7L1 901 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 ZSCAN30Q86W11 494 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 C17orf53Q8N3J3 647 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 ZNF557Q8N988 423 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 LRRC57Q8N9N7 239 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 KDM1BQ8NB78 822 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 HJURPQ8NCD3 748 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 FIBINQ8TAL6 211 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 LMX1AQ8TE12 382 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 JPH3Q8WXH2 748 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 MYEOVQ96EZ4 313 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 PGAP3Q96FM1 320 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 BTBD6Q96KE9 485 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 CNPY3Q9BT09 278 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 OLA1Q9NTK5 396 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 IP6K2Q9UHH9 426 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 ANAPC7Q9UJX3 599 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 RP1P56715 2156 aa14.13□□□□□ -0.15
SHKBP1-218ENST00000598907 PRAMEF33A0A0G2JMD5 474 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 MACROD2A1Z1Q3 448 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 TYW5A2RUC4 315 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 MYO1FO00160 1098 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 BNIP3LO60238 219 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 BUB1BO60566 1050 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 PRAMEF10O60809 474 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 PROSCO94903 275 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 MOCS3O95396 460 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 LATS1O95835 1130 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 IGLV3-25P01717 112 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 ITIH1P19827 911 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 PIGHQ14442 188 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 IFI16Q16666 785 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 DCAF6Q58WW2 860 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 MPP7Q5T2T1 576 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 ZNF787Q6DD87 383 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 C11orf63Q6NUN7 778 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 Q6ZSR6 202 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 ATCAYQ86WG3 371 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 CCDC117Q8IWD4 279 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 APCDD1Q8J025 514 aa14.12□□□□□ -0.15
SHKBP1-218ENST00000598907 CFAP52Q8N1V2 620 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms