RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 PCDHGA1Q9Y5H4 931 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 CABIN1Q9Y6J0 2220 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 FAM221BA6H8Z2 402 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 ZNF487B1APH4 448 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 INSIG1O15503 277 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 SPINT1O43278 529 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 HYAL3O43820 417 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 SOCS5O75159 536 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 DKK1O94907 266 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 C1SP09871 688 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 TIMP2P16035 220 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 GJC1P36383 396 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 YPEL5P62699 121 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 DPYSL3Q14195 570 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 PTK2BQ14289 1009 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 FGL2Q14314 439 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 PRAMEF14Q5SWL7 426 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 ZFYVE27Q5T4F4 411 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 TIGD7Q6NT04 549 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 PARGQ86W56 976 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 VSIG1Q86XK7 387 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 GATAD2AQ86YP4 633 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 ECHDC3Q96DC8 303 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 KLF6Q99612 283 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 CHP1Q99653 195 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 ATP8A1Q9Y2Q0 1164 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 MSRB2Q9Y3D2 182 aa17.9■□□□□ 0.46
SHKBP1-204ENST00000594862 KNL1Q8NG31 2342 aa17.89■□□□□ 0.46
SHKBP1-204ENST00000594862 WDFY3Q8IZQ1 3526 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 RIOK3O14730 519 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 MAFKO60675 156 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 LDOC1O95751 146 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 ALPPL2P10696 532 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 MX2P20592 715 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 ARSEP51690 589 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 THOP1P52888 689 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 CLDN2P57739 230 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 HNRNPKP61978 463 aaKnown RBP eCLIP17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 SLC10A7Q0GE19 358 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 PAFAH1B3Q15102 231 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 TCEAL1Q15170 157 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 MARC1Q5VT66 337 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 ARHGAP36Q6ZRI8 547 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 CAMK1DQ8IU85 385 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 GALNT15Q8N3T1 639 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 NETO2Q8NC67 525 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 SLC35G2Q8TBE7 412 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 FATE1Q969F0 183 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 CNDP2Q96KP4 475 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 BMFQ96LC9 184 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 ZNF830Q96NB3 372 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 NUDCD1Q96RS6 583 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 MGME1Q9BQP7 344 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 PCDH12Q9NPG4 1184 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 SPTLC3Q9NUV7 552 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 ETNK2Q9NVF9 386 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 EVA1BQ9NVM1 165 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 AMACRQ9UHK6 382 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 GGT7Q9UJ14 662 aa17.89■□□□□ 0.45
SHKBP1-204ENST00000594862 DOCK9Q9BZ29 2069 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 SPTY2D1-AS1A0A0U1RR47 76 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 NEMP2A6NFY4 417 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 ENC1O14682 589 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 RAD51BO15315 384 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 ATXN1LP0C7T5 689 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 IL4RP24394 825 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 MMP12P39900 470 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 SLC1A1P43005 524 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 MMP13P45452 471 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 RGRP47804 291 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 SCNN1BP51168 640 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 GALNT2Q10471 571 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 ILKQ13418 452 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 MESDQ14696 234 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 AGERQ15109 404 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 ANKRD20A8PQ5CZ79 823 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 LRRC38Q5VT99 294 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 UNQ6494/PRO21346Q6UXR6 183 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 KANSL1Q7Z3B3 1105 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 SLC22A18ASQ8N1D0 253 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 EID2Q8N6I1 236 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 BTN2A2Q8WVV5 523 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 CENPTQ96BT3 561 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 FAF2Q96CS3 445 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 MRFAP1L1Q96HT8 127 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 WRAP53Q9BUR4 548 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 SCUBE2Q9NQ36 999 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 FAM208BQ5VWN6 2430 aa17.88■□□□□ 0.45
SHKBP1-204ENST00000594862 POM121BA6NF01 834 aa17.87■□□□□ 0.45
SHKBP1-204ENST00000594862 TMEM110-MUSTN1A8MSY1 372 aa17.87■□□□□ 0.45
SHKBP1-204ENST00000594862 BUB1BO60566 1050 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-204ENST00000594862 MMP20O60882 483 aa17.87■□□□□ 0.45
SHKBP1-204ENST00000594862 PEX11BO96011 259 aa17.87■□□□□ 0.45
SHKBP1-204ENST00000594862 KRT10P13645 584 aa17.87■□□□□ 0.45
SHKBP1-204ENST00000594862 NME1P15531 152 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-204ENST00000594862 CES1P23141 567 aa17.87■□□□□ 0.45
SHKBP1-204ENST00000594862 GARSP41250 739 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-204ENST00000594862 TAS2R40P59535 323 aa17.87■□□□□ 0.45
SHKBP1-204ENST00000594862 PFN3P60673 137 aa17.87■□□□□ 0.45
SHKBP1-204ENST00000594862 ZNF211Q13398 564 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms