RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 A0A1W2PNU3 283 aaPredicted RBP24.17■■□□□ 1.46
LSM4-202ENST00000593564 ANKRD62A6NC57 917 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 LGALS16A8MUM7 142 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 MUSKO15146 869 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 INSIG1O15503 277 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 CREB3O43889 395 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 TMPRSS3P57727 454 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 PPARDQ03181 441 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 ELP6Q0PNE2 266 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 CYTH1Q15438 398 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 C3orf38Q5JPI3 329 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 PERM1Q5SV97 790 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 PPP1R15BQ5SWA1 713 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 FAXCQ5TGI0 409 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 RBM43Q6ZSC3 357 aaKnown RBP24.17■■□□□ 1.46
LSM4-202ENST00000593564 WDR48Q8TAF3 677 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 PCMTD1Q96MG8 357 aaPredicted RBP24.17■■□□□ 1.46
LSM4-202ENST00000593564 MCEEQ96PE7 176 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 CNPY3Q9BT09 278 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 LMBRD1Q9NUN5 540 aa24.17■■□□□ 1.46
LSM4-202ENST00000593564 LIMA1Q9UHB6 759 aaKnown RBP24.17■■□□□ 1.46
LSM4-202ENST00000593564 TSPAN11A1L157 253 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 YY2O15391 372 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 FGF10O15520 208 aaPredicted RBP24.16■■□□□ 1.46
LSM4-202ENST00000593564 TSHRP16473 764 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 XPAP23025 273 aaPredicted RBP24.16■■□□□ 1.46
LSM4-202ENST00000593564 RBMS1P29558 406 aaKnown RBP24.16■■□□□ 1.46
LSM4-202ENST00000593564 PEX5P50542 639 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 BLKP51451 505 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 RPL7AP62424 266 aaKnown RBP24.16■■□□□ 1.46
LSM4-202ENST00000593564 GRM3Q14832 879 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 IRF4Q15306 451 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 CRTC1Q6UUV9 634 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 CLEC17AQ6ZS10 378 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 DNAAF5Q86Y56 855 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 ANKRD20A12PQ8NF67 263 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 VCPIP1Q96JH7 1222 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 EXOC2Q96KP1 924 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 AGPAT1Q99943 283 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 NCAPGQ9BPX3 1015 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 DPH1Q9BZG8 443 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 UBA2Q9UBT2 640 aaPredicted RBP24.16■■□□□ 1.46
LSM4-202ENST00000593564 PCDHGA8Q9Y5G5 932 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 RP1P56715 2156 aa24.16■■□□□ 1.46
LSM4-202ENST00000593564 TMEM110-MUSTN1A8MSY1 372 aa24.15■■□□□ 1.46
LSM4-202ENST00000593564 PIGNO95427 931 aa24.15■■□□□ 1.46
LSM4-202ENST00000593564 HTR7P34969 479 aa24.15■■□□□ 1.46
LSM4-202ENST00000593564 LRRC14Q15048 493 aa24.15■■□□□ 1.46
LSM4-202ENST00000593564 ESRP1Q6NXG1 681 aaKnown RBP24.15■■□□□ 1.46
LSM4-202ENST00000593564 PCSK4Q6UW60 755 aa24.15■■□□□ 1.46
LSM4-202ENST00000593564 FSTL5Q8N475 847 aaPredicted RBP24.15■■□□□ 1.46
LSM4-202ENST00000593564 SLC46A1Q96NT5 459 aa24.15■■□□□ 1.46
LSM4-202ENST00000593564 ERGIC2Q96RQ1 377 aa24.15■■□□□ 1.46
LSM4-202ENST00000593564 LRRC19Q9H756 370 aa24.15■■□□□ 1.46
LSM4-202ENST00000593564 PDFQ9HBH1 243 aa24.15■■□□□ 1.46
LSM4-202ENST00000593564 DONSONQ9NYP3 566 aa24.15■■□□□ 1.46
LSM4-202ENST00000593564 PADI4Q9UM07 663 aa24.15■■□□□ 1.46
LSM4-202ENST00000593564 ATMQ13315 3056 aa24.14■■□□□ 1.46
LSM4-202ENST00000593564 ERVH48-1M5A8F1 160 aa24.14■■□□□ 1.45
LSM4-202ENST00000593564 HK3P52790 923 aa24.14■■□□□ 1.45
LSM4-202ENST00000593564 SKOR1P84550 965 aa24.14■■□□□ 1.45
LSM4-202ENST00000593564 UBXN1Q04323 297 aa24.14■■□□□ 1.45
LSM4-202ENST00000593564 ELOCQ15369 112 aa24.14■■□□□ 1.45
LSM4-202ENST00000593564 UGP2Q16851 508 aa24.14■■□□□ 1.45
LSM4-202ENST00000593564 WSCD2Q2TBF2 565 aa24.14■■□□□ 1.45
LSM4-202ENST00000593564 PRR11Q96HE9 360 aaPredicted RBP24.14■■□□□ 1.45
LSM4-202ENST00000593564 ZNF641Q96N77 438 aaPredicted RBP24.14■■□□□ 1.45
LSM4-202ENST00000593564 CCDC3Q9BQI4 270 aa24.14■■□□□ 1.45
LSM4-202ENST00000593564 SUV39H2Q9H5I1 410 aa24.14■■□□□ 1.45
LSM4-202ENST00000593564 PCDH12Q9NPG4 1184 aa24.14■■□□□ 1.45
LSM4-202ENST00000593564 COQ6Q9Y2Z9 468 aa24.14■■□□□ 1.45
LSM4-202ENST00000593564 LRRC10BA6NIK2 292 aa24.13■■□□□ 1.45
LSM4-202ENST00000593564 KLK10O43240 276 aa24.13■■□□□ 1.45
LSM4-202ENST00000593564 CELA2BP08218 269 aaPredicted RBP24.13■■□□□ 1.45
LSM4-202ENST00000593564 C6P13671 934 aa24.13■■□□□ 1.45
LSM4-202ENST00000593564 DESP17661 470 aa24.13■■□□□ 1.45
LSM4-202ENST00000593564 NDST2P52849 883 aa24.13■■□□□ 1.45
LSM4-202ENST00000593564 PDX1P52945 283 aa24.13■■□□□ 1.45
LSM4-202ENST00000593564 TPI1P60174 286 aa24.13■■□□□ 1.45
LSM4-202ENST00000593564 MYL5Q02045 173 aa24.13■■□□□ 1.45
LSM4-202ENST00000593564 ALG11Q2TAA5 492 aa24.13■■□□□ 1.45
LSM4-202ENST00000593564 DCUN1D2Q6PH85 259 aa24.13■■□□□ 1.45
LSM4-202ENST00000593564 LVRNQ6Q4G3 990 aa24.13■■□□□ 1.45
LSM4-202ENST00000593564 MCOLN2Q8IZK6 566 aa24.13■■□□□ 1.45
LSM4-202ENST00000593564 ARL10Q8N8L6 244 aa24.13■■□□□ 1.45
LSM4-202ENST00000593564 SCG3Q8WXD2 468 aaKnown RBP24.13■■□□□ 1.45
LSM4-202ENST00000593564 CPNE5Q9HCH3 593 aa24.13■■□□□ 1.45
LSM4-202ENST00000593564 DOLKQ9UPQ8 538 aa24.13■■□□□ 1.45
LSM4-202ENST00000593564 SSUH2Q9Y2M2 353 aa24.13■■□□□ 1.45
LSM4-202ENST00000593564 PRAMEF11O60813 436 aa24.12■■□□□ 1.45
LSM4-202ENST00000593564 RASGRP1O95267 797 aa24.12■■□□□ 1.45
LSM4-202ENST00000593564 ALPIP09923 528 aa24.12■■□□□ 1.45
LSM4-202ENST00000593564 HTR1BP28222 390 aa24.12■■□□□ 1.45
LSM4-202ENST00000593564 MLLT3P42568 568 aaPredicted RBP24.12■■□□□ 1.45
LSM4-202ENST00000593564 RHDQ02161 417 aa24.12■■□□□ 1.45
LSM4-202ENST00000593564 OGDHQ02218 1023 aa24.12■■□□□ 1.45
LSM4-202ENST00000593564 SPIDRQ14159 915 aa24.12■■□□□ 1.45
LSM4-202ENST00000593564 NFATC4Q14934 902 aa24.12■■□□□ 1.45
LSM4-202ENST00000593564 AGERQ15109 404 aa24.12■■□□□ 1.45
LSM4-202ENST00000593564 ACAD10Q6JQN1 1059 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms