RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 ADKP55263 362 aaKnown RBP20.37■□□□□ 0.85
CIRBP-239ENST00000592467 TAS2R40P59535 323 aa20.37■□□□□ 0.85
CIRBP-239ENST00000592467 MMRN1Q13201 1228 aa20.37■□□□□ 0.85
CIRBP-239ENST00000592467 UGP2Q16851 508 aa20.37■□□□□ 0.85
CIRBP-239ENST00000592467 TMCO3Q6UWJ1 677 aa20.37■□□□□ 0.85
CIRBP-239ENST00000592467 CCNI2Q6ZMN8 369 aaPredicted RBP20.37■□□□□ 0.85
CIRBP-239ENST00000592467 TMPRSS7Q7RTY8 843 aa20.37■□□□□ 0.85
CIRBP-239ENST00000592467 DCP2Q8IU60 420 aaKnown RBP20.37■□□□□ 0.85
CIRBP-239ENST00000592467 PGBD5Q8N414 524 aa20.37■□□□□ 0.85
CIRBP-239ENST00000592467 TP53I13Q8NBR0 393 aaPredicted RBP20.37■□□□□ 0.85
CIRBP-239ENST00000592467 IFT43Q96FT9 208 aa20.37■□□□□ 0.85
CIRBP-239ENST00000592467 CNDP2Q96KP4 475 aaKnown RBP20.37■□□□□ 0.85
CIRBP-239ENST00000592467 ZNF599Q96NL3 588 aa20.37■□□□□ 0.85
CIRBP-239ENST00000592467 PCDH12Q9NPG4 1184 aa20.37■□□□□ 0.85
CIRBP-239ENST00000592467 RCOR3Q9P2K3 495 aaPredicted RBP20.37■□□□□ 0.85
CIRBP-239ENST00000592467 SPTY2D1-AS1A0A0U1RR47 76 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 GOLGA8CPA6NN73 597 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 TRIM38O00635 465 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 NEMP1O14524 444 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 TRAFD1O14545 582 aaPredicted RBP20.36■□□□□ 0.85
CIRBP-239ENST00000592467 RIOK3O14730 519 aaKnown RBP20.36■□□□□ 0.85
CIRBP-239ENST00000592467 PIAS2O75928 621 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 H2AFZP0C0S5 128 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 TMEM253P0C7T8 217 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 ACADVLP49748 655 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 CDH6P55285 790 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 DNAJC3Q13217 504 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 SGCGQ13326 291 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 DPYSL3Q14195 570 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 LBRQ14739 615 aaKnown RBP20.36■□□□□ 0.85
CIRBP-239ENST00000592467 PROX2Q3B8N5 592 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 TMCO4Q5TGY1 634 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 H2AFVQ71UI9 128 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 PTAR1Q7Z6K3 402 aaPredicted RBP20.36■□□□□ 0.85
CIRBP-239ENST00000592467 CINPQ9BW66 212 aaPredicted RBP20.36■□□□□ 0.85
CIRBP-239ENST00000592467 MBNL1Q9NR56 388 aaKnown RBP20.36■□□□□ 0.85
CIRBP-239ENST00000592467 CTTNBP2NLQ9P2B4 639 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 KLF15Q9UIH9 416 aa20.36■□□□□ 0.85
CIRBP-239ENST00000592467 PNMA8BQ9ULN7 279 aaPredicted RBP20.36■□□□□ 0.85
CIRBP-239ENST00000592467 CACNA1BQ00975 2339 aa20.35■□□□□ 0.85
CIRBP-239ENST00000592467 FPGTO14772 594 aa20.35■□□□□ 0.85
CIRBP-239ENST00000592467 MMP12P39900 470 aa20.35■□□□□ 0.85
CIRBP-239ENST00000592467 RABIFP47224 123 aa20.35■□□□□ 0.85
CIRBP-239ENST00000592467 SMAD1Q15797 465 aaKnown RBP20.35■□□□□ 0.85
CIRBP-239ENST00000592467 BRAT1Q6PJG6 821 aa20.35■□□□□ 0.85
CIRBP-239ENST00000592467 SARM1Q6SZW1 724 aa20.35■□□□□ 0.85
CIRBP-239ENST00000592467 PCDH19Q8TAB3 1148 aa20.35■□□□□ 0.85
CIRBP-239ENST00000592467 CTNNBL1Q8WYA6 563 aaPredicted RBP20.35■□□□□ 0.85
CIRBP-239ENST00000592467 WRAP53Q9BUR4 548 aaKnown RBP20.35■□□□□ 0.85
CIRBP-239ENST00000592467 NHEJ1Q9H9Q4 299 aaPredicted RBP20.35■□□□□ 0.85
CIRBP-239ENST00000592467 SPTLC3Q9NUV7 552 aa20.35■□□□□ 0.85
CIRBP-239ENST00000592467 SEPT3Q9UH03 358 aa20.35■□□□□ 0.85
CIRBP-239ENST00000592467 PCDHGA1Q9Y5H4 931 aa20.35■□□□□ 0.85
CIRBP-239ENST00000592467 LRP4O75096 1905 aa20.35■□□□□ 0.85
CIRBP-239ENST00000592467 TTC24A2A3L6 582 aaPredicted RBP20.34■□□□□ 0.85
CIRBP-239ENST00000592467 TM7SF2O76062 418 aa20.34■□□□□ 0.85
CIRBP-239ENST00000592467 PRKCGP05129 697 aa20.34■□□□□ 0.85
CIRBP-239ENST00000592467 ELP6Q0PNE2 266 aa20.34■□□□□ 0.85
CIRBP-239ENST00000592467 RALGDSQ12967 914 aa20.34■□□□□ 0.85
CIRBP-239ENST00000592467 EIF2B5Q13144 721 aaKnown RBP20.34■□□□□ 0.85
CIRBP-239ENST00000592467 AGERQ15109 404 aa20.34■□□□□ 0.85
CIRBP-239ENST00000592467 ZNF542PQ5EBM4 170 aa20.34■□□□□ 0.85
CIRBP-239ENST00000592467 NCBP2-AS2Q69YL0 99 aa20.34■□□□□ 0.85
CIRBP-239ENST00000592467 MARCH9Q86YJ5 346 aa20.34■□□□□ 0.85
CIRBP-239ENST00000592467 CXorf40AQ8TE69 158 aa20.34■□□□□ 0.85
CIRBP-239ENST00000592467 SPOCK2Q92563 424 aa20.34■□□□□ 0.85
CIRBP-239ENST00000592467 FAF2Q96CS3 445 aa20.34■□□□□ 0.85
CIRBP-239ENST00000592467 ATP13A3Q9H7F0 1226 aa20.34■□□□□ 0.85
CIRBP-239ENST00000592467 COQ6Q9Y2Z9 468 aa20.34■□□□□ 0.85
CIRBP-239ENST00000592467 SIGLEC6O43699 453 aa20.33■□□□□ 0.85
CIRBP-239ENST00000592467 MFSD11O43934 449 aa20.33■□□□□ 0.85
CIRBP-239ENST00000592467 CSF2P04141 144 aa20.33■□□□□ 0.85
CIRBP-239ENST00000592467 C6P13671 934 aa20.33■□□□□ 0.85
CIRBP-239ENST00000592467 NME1P15531 152 aaKnown RBP20.33■□□□□ 0.85
CIRBP-239ENST00000592467 GM2AP17900 193 aa20.33■□□□□ 0.85
CIRBP-239ENST00000592467 SERPINA4P29622 427 aa20.33■□□□□ 0.85
CIRBP-239ENST00000592467 MAN1A1P33908 653 aa20.33■□□□□ 0.85
CIRBP-239ENST00000592467 SEMG2Q02383 582 aa20.33■□□□□ 0.85
CIRBP-239ENST00000592467 KRT81Q14533 505 aa20.33■□□□□ 0.85
CIRBP-239ENST00000592467 PAFAH1B3Q15102 231 aaKnown RBP20.33■□□□□ 0.85
CIRBP-239ENST00000592467 HADHQ16836 314 aaKnown RBP20.33■□□□□ 0.85
CIRBP-239ENST00000592467 WSCD2Q2TBF2 565 aa20.33■□□□□ 0.85
CIRBP-239ENST00000592467 DHRS13Q6UX07 377 aa20.33■□□□□ 0.85
CIRBP-239ENST00000592467 TEX26Q8N6G2 289 aa20.33■□□□□ 0.85
CIRBP-239ENST00000592467 OR4C6Q8NH72 309 aa20.33■□□□□ 0.85
CIRBP-239ENST00000592467 MGME1Q9BQP7 344 aa20.33■□□□□ 0.85
CIRBP-239ENST00000592467 ATP8A1Q9Y2Q0 1164 aa20.33■□□□□ 0.85
CIRBP-239ENST00000592467 TMEM8BA6NDV4 472 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 HTRA2O43464 458 aaPredicted RBP20.32■□□□□ 0.84
CIRBP-239ENST00000592467 AKR1B10O60218 316 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 MTA2O94776 668 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 SCNN1BP51168 640 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 RENBPP51606 427 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 AP1S1P61966 158 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 BCL2L1Q07817 233 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 GALNT2Q10471 571 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 ZNF211Q13398 564 aaPredicted RBP20.32■□□□□ 0.84
CIRBP-239ENST00000592467 CAMK2BQ13554 666 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 PDE1CQ14123 709 aaPredicted RBP20.32■□□□□ 0.84
CIRBP-239ENST00000592467 IRF4Q15306 451 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms