RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 SIM1P81133 766 aaPredicted RBP22.55■■□□□ 1.2
MBD3-208ENST00000590830 SEMG2Q02383 582 aa22.55■■□□□ 1.2
MBD3-208ENST00000590830 BNIP3Q12983 259 aa22.55■■□□□ 1.2
MBD3-208ENST00000590830 TRIP6Q15654 476 aaKnown RBP22.55■■□□□ 1.2
MBD3-208ENST00000590830 ZFYVE27Q5T4F4 411 aa22.55■■□□□ 1.2
MBD3-208ENST00000590830 GATAD2AQ86YP4 633 aa22.55■■□□□ 1.2
MBD3-208ENST00000590830 LRRC49Q8IUZ0 686 aa22.55■■□□□ 1.2
MBD3-208ENST00000590830 BAHD1Q8TBE0 780 aaPredicted RBP22.55■■□□□ 1.2
MBD3-208ENST00000590830 MGME1Q9BQP7 344 aa22.55■■□□□ 1.2
MBD3-208ENST00000590830 WRAP53Q9BUR4 548 aaKnown RBP22.55■■□□□ 1.2
MBD3-208ENST00000590830 NOD2Q9HC29 1040 aa22.55■■□□□ 1.2
MBD3-208ENST00000590830 ALG6Q9Y672 507 aa22.55■■□□□ 1.2
MBD3-208ENST00000590830 TRPM6Q9BX84 2022 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 LRRD1A4D1F6 860 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 RIOK3O14730 519 aaKnown RBP22.54■■□□□ 1.2
MBD3-208ENST00000590830 TNNT1P13805 278 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 SERPINA4P29622 427 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 SUOXP51687 545 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 MAXP61244 160 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 AP1S1P61966 158 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 BCL2L1Q07817 233 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 SGCGQ13326 291 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 ZNF235Q14590 738 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 SUZ12Q15022 739 aaKnown RBP22.54■■□□□ 1.2
MBD3-208ENST00000590830 SPA17Q15506 151 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 MARC1Q5VT66 337 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 BRAT1Q6PJG6 821 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 Q6ZSR6 202 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 ZSCAN30Q86W11 494 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 TMEM139Q8IV31 216 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 SLC22A18ASQ8N1D0 253 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 RHBDD1Q8TEB9 315 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 SAP25Q8TEE9 199 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 MAML1Q92585 1016 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 CENPTQ96BT3 561 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 TSGA13Q96PP4 275 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 NUDCD1Q96RS6 583 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 DTLQ9NZJ0 730 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 WASF3Q9UPY6 502 aa22.54■■□□□ 1.2
MBD3-208ENST00000590830 ZNF487B1APH4 448 aa22.53■■□□□ 1.2
MBD3-208ENST00000590830 FLRT2O43155 660 aa22.53■■□□□ 1.2
MBD3-208ENST00000590830 MAGEC1O60732 1142 aa22.53■■□□□ 1.2
MBD3-208ENST00000590830 TOP3BO95985 862 aaKnown RBP22.53■■□□□ 1.2
MBD3-208ENST00000590830 MMP13P45452 471 aa22.53■■□□□ 1.2
MBD3-208ENST00000590830 IHHQ14623 411 aa22.53■■□□□ 1.2
MBD3-208ENST00000590830 KANSL1Q7Z3B3 1105 aa22.53■■□□□ 1.2
MBD3-208ENST00000590830 RHOT1Q8IXI2 618 aa22.53■■□□□ 1.2
MBD3-208ENST00000590830 PLD5Q8N7P1 536 aa22.53■■□□□ 1.2
MBD3-208ENST00000590830 CXorf40AQ8TE69 158 aa22.53■■□□□ 1.2
MBD3-208ENST00000590830 RNF25Q96BH1 459 aaPredicted RBP22.53■■□□□ 1.2
MBD3-208ENST00000590830 GPR27Q9NS67 375 aa22.53■■□□□ 1.2
MBD3-208ENST00000590830 PCDHGC4Q9Y5F7 938 aa22.53■■□□□ 1.2
MBD3-208ENST00000590830 DUSP10Q9Y6W6 482 aa22.53■■□□□ 1.2
MBD3-208ENST00000590830 A0A0A6YYK5 440 aaPredicted RBP22.52■■□□□ 1.2
MBD3-208ENST00000590830 MATN3O15232 486 aa22.52■■□□□ 1.2
MBD3-208ENST00000590830 KRT1P04264 644 aa22.52■■□□□ 1.2
MBD3-208ENST00000590830 XPAP23025 273 aaPredicted RBP22.52■■□□□ 1.2
MBD3-208ENST00000590830 CCNCP24863 283 aa22.52■■□□□ 1.2
MBD3-208ENST00000590830 CDC25BP30305 580 aa22.52■■□□□ 1.2
MBD3-208ENST00000590830 HSPA9P38646 679 aaKnown RBP22.52■■□□□ 1.2
MBD3-208ENST00000590830 HNRNPDQ14103 355 aaKnown RBP22.52■■□□□ 1.2
MBD3-208ENST00000590830 IFI16Q16666 785 aaKnown RBP22.52■■□□□ 1.2
MBD3-208ENST00000590830 TPRG1LQ5T0D9 272 aa22.52■■□□□ 1.2
MBD3-208ENST00000590830 SLC9A4Q6AI14 798 aa22.52■■□□□ 1.2
MBD3-208ENST00000590830 NT5MQ9NPB1 228 aa22.52■■□□□ 1.2
MBD3-208ENST00000590830 SCUBE2Q9NQ36 999 aa22.52■■□□□ 1.2
MBD3-208ENST00000590830 MBNL1Q9NR56 388 aaKnown RBP22.52■■□□□ 1.2
MBD3-208ENST00000590830 ATP8A1Q9Y2Q0 1164 aa22.52■■□□□ 1.2
MBD3-208ENST00000590830 COQ6Q9Y2Z9 468 aa22.52■■□□□ 1.2
MBD3-208ENST00000590830 PCDHB9Q9Y5E1 797 aa22.52■■□□□ 1.2
MBD3-208ENST00000590830 HTRA2O43464 458 aaPredicted RBP22.51■■□□□ 1.19
MBD3-208ENST00000590830 SPOPO43791 374 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 TM7SF2O76062 418 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 EPHA8P29322 1005 aaPredicted RBP22.51■■□□□ 1.19
MBD3-208ENST00000590830 MMP12P39900 470 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 ELP6Q0PNE2 266 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 TAZQ16635 292 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 FAM182AQ5T1J6 154 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 CFAP58Q5T655 872 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 MFSD7Q6UXD7 560 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 NPNTQ6UXI9 565 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 KYAT3Q6YP21 454 aaKnown RBP22.51■■□□□ 1.19
MBD3-208ENST00000590830 GLRX5Q86SX6 157 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 SLCO6A1Q86UG4 719 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 VSIG1Q86XK7 387 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 SPC24Q8NBT2 197 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 ACRBPQ8NEB7 543 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 NSMCE1Q8WV22 266 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 FATE1Q969F0 183 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 LACRTQ9GZZ8 138 aa22.51■■□□□ 1.19
MBD3-208ENST00000590830 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.5■■□□□ 1.19
MBD3-208ENST00000590830 A6NNZ2 444 aa22.5■■□□□ 1.19
MBD3-208ENST00000590830 FPGTO14772 594 aa22.5■■□□□ 1.19
MBD3-208ENST00000590830 GRK6P43250 576 aa22.5■■□□□ 1.19
MBD3-208ENST00000590830 ARRB1P49407 418 aaPredicted RBP22.5■■□□□ 1.19
MBD3-208ENST00000590830 LIG3P49916 1009 aa22.5■■□□□ 1.19
MBD3-208ENST00000590830 PFN3P60673 137 aa22.5■■□□□ 1.19
MBD3-208ENST00000590830 TRAF2Q12933 501 aa22.5■■□□□ 1.19
MBD3-208ENST00000590830 RALGDSQ12967 914 aa22.5■■□□□ 1.19
MBD3-208ENST00000590830 ERAP2Q6P179 960 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms