RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 TIMMDC1Q9NPL8 285 aa11.37□□□□□ -0.59
SMAD4-211ENST00000590499 SPTLC3Q9NUV7 552 aa11.37□□□□□ -0.59
SMAD4-211ENST00000590499 ETNK2Q9NVF9 386 aa11.37□□□□□ -0.59
SMAD4-211ENST00000590499 UBA2Q9UBT2 640 aaPredicted RBP11.37□□□□□ -0.59
SMAD4-211ENST00000590499 FNDC3AQ9Y2H6 1198 aaKnown RBP11.37□□□□□ -0.59
SMAD4-211ENST00000590499 MFHAS1Q9Y4C4 1052 aa11.37□□□□□ -0.59
SMAD4-211ENST00000590499 ACACBO00763 2458 aa11.37□□□□□ -0.59
SMAD4-211ENST00000590499 ARID1BQ8NFD5 2236 aaPredicted RBP11.37□□□□□ -0.59
SMAD4-211ENST00000590499 KRTAP9-6A0A140TA67 174 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 ARHGAP42A6NI28 874 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 GIPC1O14908 333 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 MTA2O94776 668 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 POP4O95707 220 aaKnown RBP11.36□□□□□ -0.59
SMAD4-211ENST00000590499 ADRB1P08588 477 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 ZNF883P0CG24 379 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 ADRB3P13945 408 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 AMPD1P23109 780 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 IL4RP24394 825 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 MAN1A1P33908 653 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 NUDT1P36639 197 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 CTSKP43235 329 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 NEK3P51956 506 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 CCDC15Q0P6D6 951 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 SLC14A1Q13336 389 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 TEAD4Q15561 434 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 ZNF284Q2VY69 593 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 HLA-BQ31612 363 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 ZNF805Q5CZA5 627 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 NAPEPLDQ6IQ20 393 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 NEK5Q6P3R8 708 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 IL27RAQ6UWB1 636 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 ARHGAP36Q6ZRI8 547 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 ZNF354CQ86Y25 554 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 HSPH1Q92598 858 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 MRFAP1L1Q96HT8 127 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 PPP1R16AQ96I34 528 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 CCDC42Q96M95 316 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 GDAP1L1Q96MZ0 367 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 OSBPL1AQ9BXW6 950 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 GAREM1Q9H706 876 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 DYRK4Q9NR20 520 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 CTTNBP2NLQ9P2B4 639 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 RCOR3Q9P2K3 495 aaPredicted RBP11.36□□□□□ -0.59
SMAD4-211ENST00000590499 ZFR2Q9UPR6 939 aaKnown RBP11.36□□□□□ -0.59
SMAD4-211ENST00000590499 DMTF1Q9Y222 760 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 ANKRD6Q9Y2G4 727 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 SNX11Q9Y5W9 270 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 LRRK1Q38SD2 2015 aa11.36□□□□□ -0.59
SMAD4-211ENST00000590499 FRYQ5TBA9 3013 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 A0A1W2PQU0 124 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 C16orf96A6NNT2 1141 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 KRIT1O00522 736 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 INSIG1O15503 277 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 DAPK3O43293 454 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 AP1G1O43747 822 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 RNGTTO60942 597 aaKnown RBP11.35□□□□□ -0.59
SMAD4-211ENST00000590499 CER1O95813 267 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 IGSF6O95976 241 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 PEX11BO96011 259 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 UGT2B4P06133 528 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 CD48P09326 243 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 CEACAM1P13688 526 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 ARL4AP40617 200 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 NOVA1P51513 510 aaKnown RBP11.35□□□□□ -0.59
SMAD4-211ENST00000590499 ZNF75DP51815 510 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 TAS2R40P59535 323 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 RHOAP61586 193 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 TCEAL1Q15170 157 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 ZNF423Q2M1K9 1284 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 PSAPL1Q6NUJ1 521 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 DBX2Q6ZNG2 339 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 PRPF39Q86UA1 669 aaKnown RBP11.35□□□□□ -0.59
SMAD4-211ENST00000590499 HORMAD1Q86X24 394 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 RYBPQ8N488 228 aaPredicted RBP11.35□□□□□ -0.59
SMAD4-211ENST00000590499 LZTR1Q8N653 840 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 TMEM145Q8NBT3 493 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 DEFB124Q8NES8 71 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 SERAC1Q96JX3 654 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 CPEB1Q9BZB8 566 aaKnown RBP11.35□□□□□ -0.59
SMAD4-211ENST00000590499 LCMT1Q9UIC8 334 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 HRH3Q9Y5N1 445 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 FADS3Q9Y5Q0 445 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 ASPMQ8IZT6 3477 aa11.35□□□□□ -0.59
SMAD4-211ENST00000590499 TSPAN11A1L157 253 aa11.34□□□□□ -0.59
SMAD4-211ENST00000590499 DFFAO00273 331 aa11.34□□□□□ -0.59
SMAD4-211ENST00000590499 AREL1O15033 823 aa11.34□□□□□ -0.59
SMAD4-211ENST00000590499 LCA5LO95447 670 aa11.34□□□□□ -0.59
SMAD4-211ENST00000590499 CD38P28907 300 aa11.34□□□□□ -0.59
SMAD4-211ENST00000590499 MAT2AP31153 395 aaKnown RBP11.34□□□□□ -0.59
SMAD4-211ENST00000590499 RGRP47804 291 aa11.34□□□□□ -0.59
SMAD4-211ENST00000590499 CSNK1DP48730 415 aa11.34□□□□□ -0.59
SMAD4-211ENST00000590499 CDH6P55285 790 aa11.34□□□□□ -0.59
SMAD4-211ENST00000590499 IL10RBQ08334 325 aa11.34□□□□□ -0.59
SMAD4-211ENST00000590499 DPYSL3Q14195 570 aa11.34□□□□□ -0.59
SMAD4-211ENST00000590499 FGL2Q14314 439 aa11.34□□□□□ -0.59
SMAD4-211ENST00000590499 HADHQ16836 314 aaKnown RBP11.34□□□□□ -0.59
SMAD4-211ENST00000590499 ATP13A4Q4VNC1 1196 aa11.34□□□□□ -0.59
SMAD4-211ENST00000590499 SETMARQ53H47 684 aaPredicted RBP11.34□□□□□ -0.59
SMAD4-211ENST00000590499 N4BP2L1Q5TBK1 243 aaPredicted RBP11.34□□□□□ -0.59
SMAD4-211ENST00000590499 SEL1L3Q68CR1 1132 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms