RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 PCDH20Q8N6Y1 951 aaKnown RBP7.43□□□□□ -1.22
SMAD4-210ENST00000590061 NOA1Q8NC60 698 aaKnown RBP7.43□□□□□ -1.22
SMAD4-210ENST00000590061 TTC16Q8NEE8 873 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 HCAR2Q8TDS4 363 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 IFT81Q8WYA0 676 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 TTC17Q96AE7 1141 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 HMCESQ96FZ2 354 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 ZSWIM3Q96MP5 696 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 FAM161BQ96MY7 647 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 FCRL5Q96RD9 977 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 TUBGCP5Q96RT8 1024 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 PNKPQ96T60 521 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 NELL2Q99435 816 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 FMO2Q99518 471 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 LGMNQ99538 433 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 C19orf43Q9BQ61 176 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 RHOXF2Q9BQY4 288 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 OSBPL1AQ9BXW6 950 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 MAGEB5Q9BZ81 275 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 RAB6CQ9H0N0 254 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 SMG9Q9H0W8 520 aaKnown RBP7.43□□□□□ -1.22
SMAD4-210ENST00000590061 GBA3Q9H227 469 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 POMKQ9H5K3 350 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 ANLNQ9NQW6 1124 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 RBM22Q9NW64 420 aaKnown RBP eCLIP7.43□□□□□ -1.222e-11■□□□□ 8.7
SMAD4-210ENST00000590061 SEPT10Q9P0V9 454 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 ZNF212Q9UDV6 495 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 SUN2Q9UH99 717 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 FAM153AQ9UHL3 310 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 GGA2Q9UJY4 613 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 FBXO10Q9UK96 956 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 NEU3Q9UQ49 428 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 CCL26Q9Y258 94 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 HS3ST2Q9Y278 367 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 DOCK8Q8NF50 2099 aa7.43□□□□□ -1.22
SMAD4-210ENST00000590061 CHD5Q8TDI0 1954 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 UQCRHLA0A096LP55 91 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 C9orf172C9J069 976 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 MBTPS2O43462 519 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 CNTN5O94779 1100 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 POP4O95707 220 aaKnown RBP7.42□□□□□ -1.22
SMAD4-210ENST00000590061 TTC4O95801 387 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 IGSF6O95976 241 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 GSRP00390 522 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 APRTP07741 180 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 UQCRHP07919 91 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 DLDP09622 509 aaKnown RBP7.42□□□□□ -1.22
SMAD4-210ENST00000590061 DRD1P21728 446 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 PTPN3P26045 913 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 GDI1P31150 447 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 PHBP35232 272 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 RPL22P35268 128 aaKnown RBP7.42□□□□□ -1.22
SMAD4-210ENST00000590061 VIPR2P41587 438 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 KCNJ1P48048 391 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 NPY2RP49146 381 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 BASP1P80723 227 aaKnown RBP7.42□□□□□ -1.22
SMAD4-210ENST00000590061 ADCY2Q08462 1091 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 ITKQ08881 620 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 GRSF1Q12849 480 aaKnown RBP eCLIP7.42□□□□□ -1.22
SMAD4-210ENST00000590061 HTR4Q13639 388 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 LLGL1Q15334 1064 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 IZUMO3Q5VZ72 239 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 ALG1LQ6GMV1 187 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 TANGO2Q6ICL3 276 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 CXorf57Q6NSI4 855 aaKnown RBP7.42□□□□□ -1.22
SMAD4-210ENST00000590061 TTC27Q6P3X3 843 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 ZNF449Q6P9G9 518 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 VITQ6UXI7 678 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 NPNTQ6UXI9 565 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 KIAA0907Q7Z7F0 614 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-210ENST00000590061 NPWQ8N729 165 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 PEX13Q92968 403 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 ART4Q93070 314 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 CELF6Q96J87 481 aaKnown RBP7.42□□□□□ -1.22
SMAD4-210ENST00000590061 PRICKLE1Q96MT3 831 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-210ENST00000590061 GDAP1L1Q96MZ0 367 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 ZNF641Q96N77 438 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-210ENST00000590061 GUCD1Q96NT3 240 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 MYADMQ96S97 322 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 FSD1LQ9BXM9 530 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 PARD6BQ9BYG5 372 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 ATP13A3Q9H7F0 1226 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 GLOD4Q9HC38 313 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 ETNK2Q9NVF9 386 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 DNAJC17Q9NVM6 304 aaKnown RBP7.42□□□□□ -1.22
SMAD4-210ENST00000590061 BFARQ9NZS9 450 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 HACD3Q9P035 362 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 SAMD15Q9P1V8 674 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 SAE1Q9UBE0 346 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-210ENST00000590061 ATP8A1Q9Y2Q0 1164 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 NEU2Q9Y3R4 380 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 SNX10Q9Y5X0 201 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 WNT6Q9Y6F9 365 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 NCOR1O75376 2440 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 C2orf16Q68DN1 1984 aa7.42□□□□□ -1.22
SMAD4-210ENST00000590061 TBC1D3BA6NDS4 549 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 SDR42E2A6NKP2 422 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 J3QW42 95 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 KCNK1O00180 336 aa7.41□□□□□ -1.22
SMAD4-210ENST00000590061 PFDN6O15212 129 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms