RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 MTSS1O43312 755 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 MED7O43513 233 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 RASGRP1O95267 797 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 FGF3P11487 239 aaPredicted RBP12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 SULT1E1P49888 294 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 RNASE9P60153 205 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 B4GALNT1Q00973 533 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 SLC6A3Q01959 620 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 INPP5AQ14642 412 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 ARHGAP44Q17R89 818 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 CCDC40Q4G0X9 1142 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 PTPN20Q4JDL3 420 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 RAB6CQ53S08 254 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 EFHC2Q5JST6 749 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 ZNF658Q5TYW1 1059 aaPredicted RBP12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 FOXR2Q6PJQ5 311 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 C11orf57Q6ZUT1 292 aaPredicted RBP12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 TTC7BQ86TV6 843 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 GKN2Q86XP6 184 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 OR1E3Q8WZA6 343 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 NUDT22Q9BRQ3 303 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 MAGEB5Q9BZ81 275 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 RAB6CQ9H0N0 254 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 PLCB1Q9NQ66 1216 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 LRIT1Q9P2V4 623 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 ARHGEF17Q96PE2 2063 aaPredicted RBP12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 CRYBG3Q68DQ2 2970 aa12.91□□□□□ -0.34
PRKCSH-210ENST00000589990 STMND1H3BQB6 276 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 K7EM74 188 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 RNF224P0DH78 156 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 TIMP2P16035 220 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 GLB1P16278 677 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 NR1D1P20393 614 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 UGT1A3P35503 534 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 CCR10P46092 362 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 UQCRFS1P47985 274 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 BLKP51451 505 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 OR1D5P58170 312 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 KRT85P78386 507 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 LRRC63Q05C16 580 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 SLC20A2Q08357 652 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 HLTFQ14527 1009 aaKnown RBP eCLIP12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 NFATC4Q14934 902 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 MYLK3Q32MK0 819 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 AMZ1Q400G9 498 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 COBLL1Q53SF7 1204 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 BRMS1LQ5PSV4 323 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 ISM2Q6H9L7 571 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 TRNP1Q6NT89 227 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 OGFOD3Q6PK18 319 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 SLC26A9Q7LBE3 791 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 ZSCAN30Q86W11 494 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 PLA2G15Q8NCC3 412 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 FAM46DQ8NEK8 389 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 OR2AP1Q8NGE2 309 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 CXorf40AQ8TE69 158 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 NT5C3BQ969T7 300 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 MIB2Q96AX9 1013 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 RBM15Q96T37 977 aaKnown RBP eCLIP12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 APOOQ9BUR5 198 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 LRRC4CQ9HCJ2 640 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 FGF22Q9HCT0 170 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 KLQ9UEF7 1012 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 ANAPC2Q9UJX6 822 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 B3GALT1Q9Y5Z6 326 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 CACNA1DQ01668 2161 aa12.9□□□□□ -0.34
PRKCSH-210ENST00000589990 TMEM202A6NGA9 273 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 INSIG1O15503 277 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 PRKAR1AP10644 381 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 MPSTP25325 297 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 CD82P27701 267 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 USP8P40818 1118 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 MLLT10P55197 1068 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 MAZP56270 477 aaKnown RBP12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 DEUP1Q05D60 604 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 LRRC14Q15048 493 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 MAP9Q49MG5 647 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 C14orf28Q4W4Y0 310 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 ATP1A1-AS1Q5TC04 95 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 LRRC31Q6UY01 552 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 GDPD4Q6W3E5 623 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 TAF8Q7Z7C8 310 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 IL22RA1Q8N6P7 574 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 OR6C4Q8NGE1 309 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 C9orf43Q8TAL5 461 aaPredicted RBP12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 ARHGEF2Q92974 986 aaKnown RBP12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 ISG20Q96AZ6 181 aaKnown RBP12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 TMEM159Q96B96 161 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 ABHD17AQ96GS6 310 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 C1orf74Q96LT6 269 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 SRRTQ9BXP5 876 aaKnown RBP12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 ZYG11BQ9C0D3 744 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 TMEM168Q9H0V1 697 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 CHMP5Q9NZZ3 219 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 PLEKHB1Q9UF11 243 aaPredicted RBP12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 TUBD1Q9UJT1 453 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 AJAP1Q9UKB5 411 aaPredicted RBP12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 ABCA12Q86UK0 2595 aa12.89□□□□□ -0.35
PRKCSH-210ENST00000589990 IGHV5-10-1A0A0J9YXX1 117 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms