RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 KLC3Q6P597 504 aa15.38■□□□□ 0.05
MBD1-217ENST00000588937 DEFB128Q7Z7B8 93 aa15.38■□□□□ 0.05
MBD1-217ENST00000588937 CEP97Q8IW35 865 aa15.38■□□□□ 0.05
MBD1-217ENST00000588937 TMEM151AQ8N4L1 468 aa15.38■□□□□ 0.05
MBD1-217ENST00000588937 ZNF781Q8N8C0 355 aa15.38■□□□□ 0.05
MBD1-217ENST00000588937 OR13J1Q8NGT2 312 aa15.38■□□□□ 0.05
MBD1-217ENST00000588937 ZNF461Q8TAF7 563 aa15.38■□□□□ 0.05
MBD1-217ENST00000588937 PDCD6IPQ8WUM4 868 aaKnown RBP15.38■□□□□ 0.05
MBD1-217ENST00000588937 STON2Q8WXE9 905 aa15.38■□□□□ 0.05
MBD1-217ENST00000588937 DENND2DQ9H6A0 471 aaPredicted RBP15.38■□□□□ 0.05
MBD1-217ENST00000588937 CWH43Q9H720 699 aa15.38■□□□□ 0.05
MBD1-217ENST00000588937 EBF2Q9HAK2 575 aa15.38■□□□□ 0.05
MBD1-217ENST00000588937 XPR1Q9UBH6 696 aa15.38■□□□□ 0.05
MBD1-217ENST00000588937 RIMKLBQ9ULI2 386 aa15.38■□□□□ 0.05
MBD1-217ENST00000588937 L3MBTL1Q9Y468 752 aa15.38■□□□□ 0.05
MBD1-217ENST00000588937 ZFP37Q9Y6Q3 630 aaPredicted RBP15.38■□□□□ 0.05
MBD1-217ENST00000588937 TARM1B6A8C7 271 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 SOD2P04179 222 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 CES1P23141 567 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 SLC6A4P31645 630 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 PGM1P36871 562 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 GLRBP48167 497 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 RPL14P50914 215 aaKnown RBP15.37■□□□□ 0.05
MBD1-217ENST00000588937 OXCT1P55809 520 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 CNKSR3Q6P9H4 555 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 CNSTQ6PJW8 725 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 EPGNQ6UW88 154 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 CHST9Q7L1S5 443 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 MAVSQ7Z434 540 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 CILP2Q8IUL8 1156 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 MFSD6LQ8IWD5 586 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 CFAP52Q8N1V2 620 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 OR6P1Q8NGX9 317 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 NXNL1Q96CM4 212 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 CMTM5Q96DZ9 223 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 CCDC126Q96EE4 140 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 MYRFLQ96LU7 910 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 GPR78Q96P69 363 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 NUDCD1Q96RS6 583 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 OMDQ99983 421 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 MGME1Q9BQP7 344 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 PPP1R12CQ9BZL4 782 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 COG4Q9H9E3 785 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 UBA2Q9UBT2 640 aaPredicted RBP15.37■□□□□ 0.05
MBD1-217ENST00000588937 VTI1BQ9UEU0 232 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 TBX21Q9UL17 535 aa15.37■□□□□ 0.05
MBD1-217ENST00000588937 CORO1CQ9ULV4 474 aaPredicted RBP15.37■□□□□ 0.05
MBD1-217ENST00000588937 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.37■□□□□ 0.05
MBD1-217ENST00000588937 ILVBLA1L0T0 632 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 CARNS1A5YM72 827 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 COCHO43405 550 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 KDELR3O43731 214 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 NPHS1O60500 1241 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 PEX11AO75192 247 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 ABLIM3O94929 683 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 GJB5O95377 273 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 ANP32DO95626 131 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 SBK3P0C264 359 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 HMGA1P17096 107 aaKnown RBP15.36■□□□□ 0.05
MBD1-217ENST00000588937 HOXB8P17481 243 aaPredicted RBP15.36■□□□□ 0.05
MBD1-217ENST00000588937 RPL17P18621 184 aaKnown RBP15.36■□□□□ 0.05
MBD1-217ENST00000588937 RAP1GDS1P52306 607 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 GTF2A1P52655 376 aaPredicted RBP15.36■□□□□ 0.05
MBD1-217ENST00000588937 ATN1P54259 1190 aaPredicted RBP15.36■□□□□ 0.05
MBD1-217ENST00000588937 MXRA7P84157 204 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 TLE2Q04725 743 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 ACVR1Q04771 509 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 KDSRQ06136 332 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 UBAP2LQ14157 1087 aaKnown RBP15.36■□□□□ 0.05
MBD1-217ENST00000588937 VEPH1Q14D04 833 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 SPOUT1Q5T280 376 aaKnown RBP15.36■□□□□ 0.05
MBD1-217ENST00000588937 RFWD3Q6PCD5 774 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.36■□□□□ 0.05
MBD1-217ENST00000588937 ATG14Q6ZNE5 492 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 SETD3Q86TU7 594 aaPredicted RBP15.36■□□□□ 0.05
MBD1-217ENST00000588937 DENND1CQ8IV53 801 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 ENDOVQ8N8Q3 282 aaKnown RBP15.36■□□□□ 0.05
MBD1-217ENST00000588937 BRSK1Q8TDC3 778 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 HDAC10Q969S8 669 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 MYEOVQ96EZ4 313 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 TRMT2BQ96GJ1 504 aaKnown RBP15.36■□□□□ 0.05
MBD1-217ENST00000588937 CLSTN3Q9BQT9 956 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 CINPQ9BW66 212 aaPredicted RBP15.36■□□□□ 0.05
MBD1-217ENST00000588937 DCLRE1BQ9H816 532 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.36■□□□□ 0.05
MBD1-217ENST00000588937 ARIH1Q9Y4X5 557 aaPredicted RBP15.36■□□□□ 0.05
MBD1-217ENST00000588937 CHD5Q8TDI0 1954 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.36■□□□□ 0.05
MBD1-217ENST00000588937 LDB2O43679 373 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 NDST3O95803 873 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 RHOCP08134 193 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 RBP1P09455 135 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 PRDX6P30041 224 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 CORO1AP31146 461 aaKnown RBP15.36■□□□□ 0.05
MBD1-217ENST00000588937 SLC26A3P40879 764 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 CPA2P48052 419 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 DNAJB13P59910 316 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 USP4Q13107 963 aa15.36■□□□□ 0.05
MBD1-217ENST00000588937 ZNF177Q13360 481 aaPredicted RBP15.36■□□□□ 0.05
MBD1-217ENST00000588937 ZNF460Q14592 562 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms