RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 A0A1W2PQU0 124 aa20.39■□□□□ 0.85
DDX39A-207ENST00000588542 KHNYNO15037 678 aaKnown RBP20.39■□□□□ 0.85
DDX39A-207ENST00000588542 HTRA2O43464 458 aaPredicted RBP20.39■□□□□ 0.85
DDX39A-207ENST00000588542 SERPINF2P08697 491 aa20.39■□□□□ 0.85
DDX39A-207ENST00000588542 MAT2AP31153 395 aaKnown RBP20.39■□□□□ 0.85
DDX39A-207ENST00000588542 CETN2P41208 172 aa20.39■□□□□ 0.85
DDX39A-207ENST00000588542 ZNF284Q2VY69 593 aa20.39■□□□□ 0.85
DDX39A-207ENST00000588542 TMEM259Q4ZIN3 620 aa20.39■□□□□ 0.85
DDX39A-207ENST00000588542 BRAT1Q6PJG6 821 aa20.39■□□□□ 0.85
DDX39A-207ENST00000588542 HORMAD1Q86X24 394 aa20.39■□□□□ 0.85
DDX39A-207ENST00000588542 ARRDC2Q8TBH0 407 aa20.39■□□□□ 0.85
DDX39A-207ENST00000588542 UBE2Q2Q8WVN8 375 aa20.39■□□□□ 0.85
DDX39A-207ENST00000588542 SEMA3CQ99985 751 aa20.39■□□□□ 0.85
DDX39A-207ENST00000588542 CEP41Q9BYV8 373 aa20.39■□□□□ 0.85
DDX39A-207ENST00000588542 TM9SF3Q9HD45 589 aa20.39■□□□□ 0.85
DDX39A-207ENST00000588542 SUSD2Q9UGT4 822 aa20.39■□□□□ 0.85
DDX39A-207ENST00000588542 TPX2Q9ULW0 747 aaKnown RBP20.39■□□□□ 0.85
DDX39A-207ENST00000588542 DNAH14Q0VDD8 3507 aa20.39■□□□□ 0.85
DDX39A-207ENST00000588542 LNP1A1A4G5 178 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 WNT9AO14904 365 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 BCAT2O15382 392 aaPredicted RBP20.38■□□□□ 0.85
DDX39A-207ENST00000588542 SOCS5O75159 536 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 PCDH8O95206 1070 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 GNSP15586 552 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 DSC2Q02487 901 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 ITKQ08881 620 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 NIPAL4Q0D2K0 466 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 TRAF2Q12933 501 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 NOMO1Q15155 1222 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 UGP2Q16851 508 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 SEL1L3Q68CR1 1132 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 RABEPKQ7Z6M1 372 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 ZC3H18Q86VM9 953 aaKnown RBP20.38■□□□□ 0.85
DDX39A-207ENST00000588542 TFB1MQ8WVM0 346 aaKnown RBP20.38■□□□□ 0.85
DDX39A-207ENST00000588542 SPOCK2Q92563 424 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 ALS2CR12Q96Q35 445 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 FSCN3Q9NQT6 498 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 SLC6A14Q9UN76 642 aa20.38■□□□□ 0.85
DDX39A-207ENST00000588542 CEP250Q9BV73 2442 aa20.37■□□□□ 0.85
DDX39A-207ENST00000588542 KNL1Q8NG31 2342 aa20.37■□□□□ 0.85
DDX39A-207ENST00000588542 UPK3BL1B0FP48 263 aa20.37■□□□□ 0.85
DDX39A-207ENST00000588542 UPK3BL2E5RIL1 263 aa20.37■□□□□ 0.85
DDX39A-207ENST00000588542 TSPAN6O43657 245 aa20.37■□□□□ 0.85
DDX39A-207ENST00000588542 GDF9O60383 454 aa20.37■□□□□ 0.85
DDX39A-207ENST00000588542 CFIP05156 583 aa20.37■□□□□ 0.85
DDX39A-207ENST00000588542 SUOXP51687 545 aa20.37■□□□□ 0.85
DDX39A-207ENST00000588542 OTUD4Q01804 1114 aaKnown RBP20.37■□□□□ 0.85
DDX39A-207ENST00000588542 KLF1Q13351 362 aaPredicted RBP20.37■□□□□ 0.85
DDX39A-207ENST00000588542 PRPF39Q86UA1 669 aaKnown RBP20.37■□□□□ 0.85
DDX39A-207ENST00000588542 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.37■□□□□ 0.85
DDX39A-207ENST00000588542 C12orf50Q8NA57 414 aaPredicted RBP20.37■□□□□ 0.85
DDX39A-207ENST00000588542 TRIM58Q8NG06 486 aa20.37■□□□□ 0.85
DDX39A-207ENST00000588542 ACTL9Q8TC94 416 aa20.37■□□□□ 0.85
DDX39A-207ENST00000588542 KLK6Q92876 244 aa20.37■□□□□ 0.85
DDX39A-207ENST00000588542 SLC6A18Q96N87 628 aa20.37■□□□□ 0.85
DDX39A-207ENST00000588542 QKIQ96PU8 341 aaKnown RBP eCLIP20.37■□□□□ 0.85
DDX39A-207ENST00000588542 PCDH12Q9NPG4 1184 aa20.37■□□□□ 0.85
DDX39A-207ENST00000588542 SEPT10Q9P0V9 454 aa20.37■□□□□ 0.85
DDX39A-207ENST00000588542 TTLL3Q9Y4R7 772 aa20.37■□□□□ 0.85
DDX39A-207ENST00000588542 HACD1B0YJ81 288 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 RIOK3O14730 519 aaKnown RBP20.36■□□□□ 0.85
DDX39A-207ENST00000588542 FOXD2O60548 495 aaPredicted RBP20.36■□□□□ 0.85
DDX39A-207ENST00000588542 NEBLO76041 1014 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 TJP3O95049 919 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 PRKCGP05129 697 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 MMP2P08253 660 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 CES1P23141 567 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 PTPN3P26045 913 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 BNC1Q01954 994 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 WASHC5Q12768 1159 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 XRCC4Q13426 336 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 FGL2Q14314 439 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 RPS6KA1Q15418 735 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 SLC45A4Q5BKX6 768 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 CFAP58Q5T655 872 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 CCDC181Q5TID7 509 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 KIAA1161Q6NSJ0 714 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 FEM1CQ96JP0 617 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 TLR10Q9BXR5 811 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 NUSAP1Q9BXS6 441 aaKnown RBP20.36■□□□□ 0.85
DDX39A-207ENST00000588542 DMTF1Q9Y222 760 aa20.36■□□□□ 0.85
DDX39A-207ENST00000588542 TCRBV7S2A1N4TA0A589 114 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 IGLON5A6NGN9 336 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 PRR5-ARHGAP8B1AHC4 643 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 FZD6O60353 706 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 PRLRP16471 622 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 XPAP23025 273 aaPredicted RBP20.35■□□□□ 0.85
DDX39A-207ENST00000588542 NUDT1P36639 197 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 MMP12P39900 470 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 CSNK1EP49674 416 aaKnown RBP20.35■□□□□ 0.85
DDX39A-207ENST00000588542 AFF3P51826 1226 aaKnown RBP20.35■□□□□ 0.85
DDX39A-207ENST00000588542 RPS21P63220 83 aaKnown RBP20.35■□□□□ 0.85
DDX39A-207ENST00000588542 RACK1P63244 317 aaKnown RBP20.35■□□□□ 0.85
DDX39A-207ENST00000588542 TMEM52BQ4KMG9 183 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 AASDHQ4L235 1098 aaPredicted RBP20.35■□□□□ 0.85
DDX39A-207ENST00000588542 SETMARQ53H47 684 aaPredicted RBP20.35■□□□□ 0.85
DDX39A-207ENST00000588542 TEX44Q53QW1 395 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 LAYNQ6UX15 382 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 SERAC1Q96JX3 654 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 AGAP3Q96P47 875 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms