RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 PDFQ9HBH1 243 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 CASS4Q9NQ75 786 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 RBM22Q9NW64 420 aaKnown RBP eCLIP12.11□□□□□ -0.47
GGA3-217ENST00000583667 EURLQ9NYK6 297 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 SEPT10Q9P0V9 454 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 RSPH14Q9UHP6 348 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 LGALS13Q9UHV8 139 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 SLC24A2Q9UI40 661 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 LSM7Q9UK45 103 aaKnown RBP12.11□□□□□ -0.47
GGA3-217ENST00000583667 A0A1W2PRU2 124 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 SDR42E2A6NKP2 422 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 A6NNZ2 444 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 PATE3B3GLJ2 98 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 GOLGA8MH3BSY2 632 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 CDH16O75309 829 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 RHOBTB1O94844 696 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 ACSL3O95573 720 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 AGTP01019 485 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 MYL4P12829 197 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 NFKB1P19838 968 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 CES1P23141 567 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 VIPR2P41587 438 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 CCR2P41597 374 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 ELK3P41970 407 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 OXCT1P55809 520 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 IRX4P78413 519 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 CCINQ13939 588 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 FASTKD3Q14CZ7 662 aaKnown RBP12.1□□□□□ -0.47
GGA3-217ENST00000583667 KRT71Q3SY84 523 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 BBS9Q3SYG4 887 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 TUBB8Q3ZCM7 444 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 ARHGAP15Q53QZ3 475 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 FAXCQ5TGI0 409 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 MARC1Q5VT66 337 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 STEAP4Q687X5 459 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 PKN3Q6P5Z2 889 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 RFWD3Q6PCD5 774 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 C3orf62Q6ZUJ4 267 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 RAB44Q7Z6P3 723 aaPredicted RBP12.1□□□□□ -0.47
GGA3-217ENST00000583667 TFAP2DQ7Z6R9 452 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 PALM2Q8IXS6 379 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 CMTM8Q8IZV2 173 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 AGGF1Q8N302 714 aaeCLIP12.1□□□□□ -0.47
GGA3-217ENST00000583667 SYNPOQ8N3V7 929 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 MAB21L3Q8N8X9 362 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 NETO2Q8NC67 525 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 HJURPQ8NCD3 748 aaPredicted RBP12.1□□□□□ -0.47
GGA3-217ENST00000583667 FBXO36Q8NEA4 188 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 DEPDC1BQ8WUY9 529 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 NSMCE1Q8WV22 266 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 TMA16Q96EY4 203 aaKnown RBP12.1□□□□□ -0.47
GGA3-217ENST00000583667 MSANTD3Q96H12 275 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 ZSWIM3Q96MP5 696 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 AGAP3Q96P47 875 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 UBL7Q96S82 380 aaPredicted RBP12.1□□□□□ -0.47
GGA3-217ENST00000583667 DHRS4Q9BTZ2 278 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 MLPHQ9BV36 600 aaPredicted RBP12.1□□□□□ -0.47
GGA3-217ENST00000583667 ACSS3Q9H6R3 686 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 C8orf33Q9H7E9 229 aaPredicted RBP12.1□□□□□ -0.47
GGA3-217ENST00000583667 ARNT2Q9HBZ2 717 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 TRPC7Q9HCX4 862 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 HAUS2Q9NVX0 235 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 RABGEF1Q9UJ41 708 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 OBSL1O75147 1896 aa12.1□□□□□ -0.47
GGA3-217ENST00000583667 DENND4CQ5VZ89 1909 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 PCNX2A6NKB5 2137 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 FAM155BO75949 473 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 ALDH1A2O94788 518 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 EPOP01588 193 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 C1QAP02745 245 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 CKMP06732 381 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 HOXD9P28356 352 aaPredicted RBP12.09□□□□□ -0.47
GGA3-217ENST00000583667 ADRA1AP35348 466 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 LMAN1P49257 510 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 GEMP55040 296 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 RPS24P62847 133 aaKnown RBP12.09□□□□□ -0.47
GGA3-217ENST00000583667 CYP4F8P98187 520 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 MPP3Q13368 585 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 KLHL38Q2WGJ6 581 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 MPPE1Q53F39 396 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 UBAP2Q5T6F2 1119 aaKnown RBP12.09□□□□□ -0.47
GGA3-217ENST00000583667 NAPEPLDQ6IQ20 393 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 CXorf57Q6NSI4 855 aaKnown RBP12.09□□□□□ -0.47
GGA3-217ENST00000583667 PIP4P1Q86T03 277 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 IGDCC3Q8IVU1 814 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 MFSD6LQ8IWD5 586 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 CFAP52Q8N1V2 620 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 TAB3Q8N5C8 712 aaPredicted RBP12.09□□□□□ -0.47
GGA3-217ENST00000583667 MDM1Q8TC05 714 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 CSGALNACT1Q8TDX6 532 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 SMARCD2Q92925 531 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 TCEAL4Q96EI5 215 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 IMP4Q96G21 291 aaKnown RBP12.09□□□□□ -0.47
GGA3-217ENST00000583667 CRELD1Q96HD1 420 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 DNAJC17Q9NVM6 304 aaKnown RBP12.09□□□□□ -0.47
GGA3-217ENST00000583667 SMPD4Q9NXE4 827 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 OR51B4Q9Y5P0 310 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 CACNA1EQ15878 2313 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 CHD5Q8TDI0 1954 aa12.09□□□□□ -0.47
GGA3-217ENST00000583667 SPECC1L-ADORA2AF8WAN1 911 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms