RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 PMS2P2O95744 297 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 UMODP07911 640 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 SRD5A1P18405 259 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 RYKP34925 604 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 PIGAP37287 484 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 GRK6P43250 576 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 ACSM2AQ08AH3 577 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 ANKRD1Q15327 319 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 SOWAHAQ2M3V2 549 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 C10orf62Q5T681 223 aaPredicted RBP4.13□□□□□ -1.75
COPS3-217ENST00000583160 ANO1Q5XXA6 986 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 DSTYKQ6XUX3 929 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 MOB3CQ70IA8 216 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 HERC6Q8IVU3 1022 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 NAGSQ8N159 534 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 NEK9Q8TD19 979 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 SORCS1Q8WY21 1168 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 OTULINQ96BN8 352 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 COG8Q96MW5 612 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.13□□□□□ -1.75
COPS3-217ENST00000583160 ERRFI1Q9UJM3 462 aaPredicted RBP4.13□□□□□ -1.75
COPS3-217ENST00000583160 SNX9Q9Y5X1 595 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 C17orf113A0A1B0GUU1 675 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 CPED1A4D0V7 1026 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 VWA3AA6NCI4 1184 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 FAM90A7PA6NKC0 464 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 FAM90A22PA8MWA6 464 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 FAM90A12PA8MX19 464 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 FAM90A23PA8MXZ1 464 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 PER2O15055 1255 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 KLK10O43240 276 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 SOCS5O75159 536 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 GAGE7O76087 117 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 CNPP09543 421 aaKnown RBP4.12□□□□□ -1.75
COPS3-217ENST00000583160 GAGE12FP0CL80 117 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 GAGE12GP0CL81 117 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 GAGE12IP0CL82 117 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 ZNF8P17098 575 aaPredicted RBP4.12□□□□□ -1.75
COPS3-217ENST00000583160 TCEA1P23193 301 aaKnown RBP4.12□□□□□ -1.75
COPS3-217ENST00000583160 TRAPPC10P48553 1259 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 RHBDL3P58872 404 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 GAGE1Q13065 139 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 GAGE4Q13068 117 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 OS9Q13438 667 aaPredicted RBP4.12□□□□□ -1.75
COPS3-217ENST00000583160 RUNX2Q13950 521 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 ARHGEF6Q15052 776 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 OTUD3Q5T2D3 398 aaPredicted RBP4.12□□□□□ -1.75
COPS3-217ENST00000583160 UNQ6126/PRO20091Q6UXV3 157 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 C2CD5Q86YS7 1000 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 USP38Q8NB14 1042 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 CCT6BQ92526 530 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 STAMQ92783 540 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 TBC1D20Q96BZ9 403 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 ZNF385AQ96PM9 386 aaKnown RBP4.12□□□□□ -1.75
COPS3-217ENST00000583160 CD180Q99467 661 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 SDF2L1Q9HCN8 221 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 CYSLTR2Q9NS75 346 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 ALKBH4Q9NXW9 302 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 SMARCAL1Q9NZC9 954 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 SLC9A2Q9UBY0 812 aa4.12□□□□□ -1.75
COPS3-217ENST00000583160 CBY3A6NI87 242 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 HNRNPCL2B2RXH8 293 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 KLRF2D3W0D1 207 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 IRAK2O43187 625 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 CLDN14O95500 239 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 AMD1P17707 334 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 BLKP51451 505 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 ARL16Q0P5N6 197 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 TBL3Q12788 808 aaKnown RBP4.11□□□□□ -1.75
COPS3-217ENST00000583160 NAA25Q14CX7 972 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 ESCO2Q56NI9 601 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 MEX3BQ6ZN04 569 aaKnown RBP4.11□□□□□ -1.75
COPS3-217ENST00000583160 C9orf139Q6ZV77 190 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 TUBA1AQ71U36 451 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 ZC3HC1Q86WB0 502 aaKnown RBP4.11□□□□□ -1.75
COPS3-217ENST00000583160 CD101Q93033 1021 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 HES6Q96HZ4 224 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 CSF3RQ99062 836 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 EPYCQ99645 322 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 TUBA1CQ9BQE3 449 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 MROH8Q9H579 483 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 EPHX3Q9H6B9 360 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 SLCO3A1Q9UIG8 710 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 PCDHAC2Q9Y5I4 1007 aa4.11□□□□□ -1.75
COPS3-217ENST00000583160 IGHV4OR15-8A0A075B7B6 117 aa4.1□□□□□ -1.75
COPS3-217ENST00000583160 PABPN1LA6NDY0 278 aaKnown RBP4.1□□□□□ -1.75
COPS3-217ENST00000583160 WNT9BO14905 357 aa4.1□□□□□ -1.75
COPS3-217ENST00000583160 ZIC3O60481 467 aa4.1□□□□□ -1.75
COPS3-217ENST00000583160 LMX1BO60663 402 aa4.1□□□□□ -1.75
COPS3-217ENST00000583160 KDM4BO94953 1096 aa4.1□□□□□ -1.75
COPS3-217ENST00000583160 SP1P08047 785 aa4.1□□□□□ -1.75
COPS3-217ENST00000583160 PTPN2P17706 415 aa4.1□□□□□ -1.75
COPS3-217ENST00000583160 PAPOLAP51003 745 aaKnown RBP4.1□□□□□ -1.75
COPS3-217ENST00000583160 NR1H2P55055 460 aa4.1□□□□□ -1.75
COPS3-217ENST00000583160 ARL4CP56559 192 aa4.1□□□□□ -1.75
COPS3-217ENST00000583160 YWHAZP63104 245 aaKnown RBP4.1□□□□□ -1.75
COPS3-217ENST00000583160 ECT2LQ008S8 904 aa4.1□□□□□ -1.75
COPS3-217ENST00000583160 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
COPS3-217ENST00000583160 C17orf99Q6UX52 265 aa4.1□□□□□ -1.75
COPS3-217ENST00000583160 TBC1D26Q86UD7 250 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms