RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	WSCD2	Q2TBF2	565 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	C6orf132	Q5T0Z8	1188 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ARHGAP40	Q5TG30	622 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	DCUN1D2	Q6PH85	259 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	MACC1	Q6ZN28	852 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	RBM44	Q6ZP01	1051 aa	Known RBP	11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	HID1	Q8IV36	788 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ANKRD20A12P	Q8NF67	263 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	KCNE4	Q8WWG9	221 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TSACC	Q96A04	125 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	VCPIP1	Q96JH7	1222 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CCDC3	Q9BQI4	270 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	BOC	Q9BWV1	1114 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CATSPERB	Q9H7T0	1116 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PCDH12	Q9NPG4	1184 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ASCL3	Q9NQ33	180 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	WDR70	Q9NW82	654 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TAS2R14	Q9NYV8	317 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	UBA2	Q9UBT2	640 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	LIMA1	Q9UHB6	759 aa	Known RBP	11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	DOLK	Q9UPQ8	538 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	OR1A2	Q9Y585	309 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ENTPD2	Q9Y5L3	495 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	RP1	P56715	2156 aa		11.75	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	LRRK1	Q38SD2	2015 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	LMO7DN	F2Z398	122 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	AGRP	O00253	132 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TPP1	O14773	563 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	C6	P13671	934 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	RGR	P47804	291 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	RPIA	P49247	311 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	YBEY	P58557	167 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	MYL5	Q02045	173 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	LRRC14	Q15048	493 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CA9	Q16790	459 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PARP15	Q460N3	678 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	INO80D	Q53TQ3	878 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PPP1R15B	Q5SWA1	713 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CFAP58	Q5T655	872 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	BROX	Q5VW32	411 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	KCTD16	Q68DU8	428 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ACAD10	Q6JQN1	1059 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SASS6	Q6UVJ0	657 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ENPP7	Q6UWV6	458 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CAMK1D	Q8IU85	385 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	LSMEM2	Q8N112	164 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	KY	Q8NBH2	561 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PCDH19	Q8TAB3	1148 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CASKIN2	Q8WXE0	1202 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	GLMN	Q92990	594 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CNPY3	Q9BT09	278 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SUV39H2	Q9H5I1	410 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	THSD1	Q9NS62	852 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	NCKIPSD	Q9NZQ3	722 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	DKK3	Q9UBP4	350 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PCSK1N	Q9UHG2	260 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PADI4	Q9UM07	663 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	AP4E1	Q9UPM8	1137 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	MFHAS1	Q9Y4C4	1052 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	DAAM1	Q9Y4D1	1078 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	MGA	Q8IWI9	3026 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	KIF26B	Q2KJY2	2108 aa		11.74	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TEX51	A0A1B0GUA7	166 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	WASH4P	A8MWX3	477 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	LZTS3	O60299	673 aa	Predicted RBP	11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	BUB1B	O60566	1050 aa	Predicted RBP	11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	DXO	O77932	396 aa	Known RBP	11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CTSE	P14091	401 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PSMA2	P25787	234 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	RBMS1	P29558	406 aa	Known RBP	11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	LIG3	P49916	1009 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PAPOLA	P51003	745 aa	Known RBP	11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TMPRSS3	P57727	454 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ERVPABLB-1	P60509	514 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	YPEL5	P62699	121 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ELP6	Q0PNE2	266 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SPIDR	Q14159	915 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	INPP5A	Q14642	412 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	UGP2	Q16851	508 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ALG11	Q2TAA5	492 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TMEM52B	Q4KMG9	183 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	TAF1B	Q53T94	588 aa	Predicted RBP	11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ESRP1	Q6NXG1	681 aa	Known RBP	11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PCSK4	Q6UW60	755 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ARHGAP36	Q6ZRI8	547 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ZSWIM9	Q86XI8	627 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	MCOLN2	Q8IZK6	566 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	UMODL1-AS1	Q8N2C9	162 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PAF1	Q8N7H5	531 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PEBP4	Q96S96	227 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	CPEB1	Q9BZB8	566 aa	Known RBP	11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	SLC39A8	Q9C0K1	460 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	DHX35	Q9H5Z1	703 aa	Known RBP	11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	LRRC19	Q9H756	370 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	PDF	Q9HBH1	243 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ANO10	Q9NW15	660 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	RABGEF1	Q9UJ41	708 aa		11.73	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	ANKRD36	A6QL64	1941 aa		11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114	GCN1	Q92616	2671 aa	Known RBP	11.72	□□□□□ -0.53
CDK5RAP3-223	ENST00000582114		A8MX80	341 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms