RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 ATPAF2Q8N5M1 289 aa25.13■■□□□ 1.61
CDC42EP4-205ENST00000580315 NSMCE1Q8WV22 266 aa25.13■■□□□ 1.61
CDC42EP4-205ENST00000580315 PANX2Q96RD6 677 aa25.13■■□□□ 1.61
CDC42EP4-205ENST00000580315 ZNF670Q9BS34 389 aa25.13■■□□□ 1.61
CDC42EP4-205ENST00000580315 GDF3Q9NR23 364 aa25.13■■□□□ 1.61
CDC42EP4-205ENST00000580315 DKK3Q9UBP4 350 aa25.13■■□□□ 1.61
CDC42EP4-205ENST00000580315 SEPT3Q9UH03 358 aa25.13■■□□□ 1.61
CDC42EP4-205ENST00000580315 TLR4O00206 839 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 WNT9AO14904 365 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 SLC31A1O15431 190 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 CD48P09326 243 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 PRLRP16471 622 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 XPAP23025 273 aaPredicted RBP25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 IL4RP24394 825 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 ARSEP51690 589 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 MMRN1Q13201 1228 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 LBRQ14739 615 aaKnown RBP25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 TCEAL1Q15170 157 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 CFAP58Q5T655 872 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 GATAD2AQ86YP4 633 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 LRRC49Q8IUZ0 686 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 TP53INP2Q8IXH6 220 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 BBS5Q8N3I7 341 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 TSEN2Q8NCE0 465 aaKnown RBP25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 HCAR2Q8TDS4 363 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 KLK6Q92876 244 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 TUBGCP5Q96RT8 1024 aa25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 ELF4Q99607 663 aaPredicted RBP25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 ZFR2Q9UPR6 939 aaKnown RBP25.12■■□□□ 1.61
CDC42EP4-205ENST00000580315 INSIG1O15503 277 aa25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 HNRNPA2B1P22626 353 aaKnown RBP25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 ABL2P42684 1182 aa25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 SUOXP51687 545 aa25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 NSUN2Q08J23 767 aaKnown RBP eCLIP25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 ZNF235Q14590 738 aa25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 TMEM259Q4ZIN3 620 aa25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 ANKRD20A8PQ5CZ79 823 aa25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 SEL1L3Q68CR1 1132 aa25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 SRLQ86TD4 932 aa25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 VOPP1Q96AW1 172 aa25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 ZNF641Q96N77 438 aaPredicted RBP25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 PSKH2Q96QS6 385 aa25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 SLC17A9Q9BYT1 436 aa25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 SUV39H2Q9H5I1 410 aa25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 ATP13A3Q9H7F0 1226 aa25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 KLHL11Q9NVR0 708 aa25.11■■□□□ 1.61
CDC42EP4-205ENST00000580315 A0A087WV48 116 aa25.1■■□□□ 1.61
CDC42EP4-205ENST00000580315 PIGNO95427 931 aa25.1■■□□□ 1.61
CDC42EP4-205ENST00000580315 LCA5LO95447 670 aa25.1■■□□□ 1.61
CDC42EP4-205ENST00000580315 SERPINA4P29622 427 aa25.1■■□□□ 1.61
CDC42EP4-205ENST00000580315 HSPA9P38646 679 aaKnown RBP25.1■■□□□ 1.61
CDC42EP4-205ENST00000580315 SLC1A1P43005 524 aa25.1■■□□□ 1.61
CDC42EP4-205ENST00000580315 NXPH1P58417 271 aa25.1■■□□□ 1.61
CDC42EP4-205ENST00000580315 SGCGQ13326 291 aa25.1■■□□□ 1.61
CDC42EP4-205ENST00000580315 SHBQ15464 509 aa25.1■■□□□ 1.61
CDC42EP4-205ENST00000580315 TMPRSS12Q86WS5 348 aa25.1■■□□□ 1.61
CDC42EP4-205ENST00000580315 KNTC1P50748 2209 aa25.09■■□□□ 1.61
CDC42EP4-205ENST00000580315 MAFKO60675 156 aa25.09■■□□□ 1.61
CDC42EP4-205ENST00000580315 IPO7O95373 1038 aaKnown RBP25.09■■□□□ 1.61
CDC42EP4-205ENST00000580315 BRAT1Q6PJG6 821 aa25.09■■□□□ 1.61
CDC42EP4-205ENST00000580315 TMTC1Q8IUR5 882 aa25.09■■□□□ 1.61
CDC42EP4-205ENST00000580315 OXR1Q8N573 874 aa25.09■■□□□ 1.61
CDC42EP4-205ENST00000580315 PAF1Q8N7H5 531 aa25.09■■□□□ 1.61
CDC42EP4-205ENST00000580315 TMEM145Q8NBT3 493 aa25.09■■□□□ 1.61
CDC42EP4-205ENST00000580315 PCDH19Q8TAB3 1148 aa25.09■■□□□ 1.61
CDC42EP4-205ENST00000580315 FAM174AQ8TBP5 190 aa25.09■■□□□ 1.61
CDC42EP4-205ENST00000580315 KLHDC7BQ96G42 594 aa25.09■■□□□ 1.61
CDC42EP4-205ENST00000580315 BBC3Q96PG8 261 aaPredicted RBP25.09■■□□□ 1.61
CDC42EP4-205ENST00000580315 MYOCQ99972 504 aa25.09■■□□□ 1.61
CDC42EP4-205ENST00000580315 PCDHGA1Q9Y5H4 931 aa25.09■■□□□ 1.61
CDC42EP4-205ENST00000580315 GCN1Q92616 2671 aaKnown RBP25.09■■□□□ 1.61
CDC42EP4-205ENST00000580315 AREL1O15033 823 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 YKT6O15498 198 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 TIMP2P16035 220 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 KDELR1P24390 212 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 NOP2P46087 812 aaKnown RBP25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 RGRP47804 291 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 ARRB1P49407 418 aaPredicted RBP25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 SCNN1BP51168 640 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 AP1S1P61966 158 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 BCL2L1Q07817 233 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 SLC10A7Q0GE19 358 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 ELP6Q0PNE2 266 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 PAFAH1B3Q15102 231 aaKnown RBP25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 ODF2Q5BJF6 829 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 LRRC38Q5VT99 294 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 NCBP2-AS2Q69YL0 99 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 SAP25Q8TEE9 199 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 FAF2Q96CS3 445 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 ERVMER34-1Q9H9K5 563 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 FZD3Q9NPG1 666 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 ITM2BQ9Y287 266 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 CA5BQ9Y2D0 317 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 PCDHA13Q9Y5I0 950 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 PLXNA2O75051 1894 aa25.08■■□□□ 1.61
CDC42EP4-205ENST00000580315 ASXL3Q9C0F0 2248 aa25.08■■□□□ 1.6
CDC42EP4-205ENST00000580315 TSPAN11A1L157 253 aa25.07■■□□□ 1.6
CDC42EP4-205ENST00000580315 LRRD1A4D1F6 860 aa25.07■■□□□ 1.6
CDC42EP4-205ENST00000580315 ENC1O14682 589 aa25.07■■□□□ 1.6
CDC42EP4-205ENST00000580315 MFSD11O43934 449 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms