RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 CCDC196A0A1B0GTZ2 297 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 A0A1B0GVC2 190 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 IFNL4K9M1U5 179 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 TACC1O75410 805 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 HEXAP06865 529 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 CBSLP0DN79 551 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 TFPIP10646 304 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 ZNF12P17014 697 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 ITGAXP20702 1163 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 CBSP35520 551 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 PDLIM4P50479 330 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 UFM1P61960 85 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 RUNX2Q13950 521 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 TAF11Q15544 211 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 RBM23Q86U06 439 aaKnown RBP5.45□□□□□ -1.54
NUP88-213ENST00000576862 GPAT4Q86UL3 456 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 AADATQ8N5Z0 425 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 C11orf65Q8NCR3 313 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 GJC3Q8NFK1 279 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 ADAMTS15Q8TE58 950 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 ST8SIA4Q92187 359 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 TRIB2Q92519 343 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 RNF125Q96EQ8 232 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 TBATAQ96M53 351 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 EIF2AK1Q9BQI3 630 aaKnown RBP5.45□□□□□ -1.54
NUP88-213ENST00000576862 SLC25A33Q9BSK2 321 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 SEZ6LQ9BYH1 1024 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 AGXT2Q9BYV1 514 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 NUF2Q9BZD4 464 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 GLIS2Q9BZE0 524 aaPredicted RBP5.45□□□□□ -1.54
NUP88-213ENST00000576862 C20orf141Q9NUB4 165 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 GTF2A1LQ9UNN4 478 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 CYP46A1Q9Y6A2 500 aa5.45□□□□□ -1.54
NUP88-213ENST00000576862 HMGXB3Q12766 1538 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 DYTNA2CJ06 578 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 C4orf47A7E2U8 309 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 RGS11O94810 467 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 AGR2O95994 175 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 FMO4P31512 558 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 CCKBRP32239 447 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 DSCR9P59020 149 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 RUSC1-AS1Q66K80 236 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 LRRC8EQ6NSJ5 796 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 CCDC129Q6ZRS4 1044 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 NOXA1Q86UR1 476 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 CCDC105Q8IYK2 499 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 PARP16Q8N5Y8 322 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 IL17REQ8NFR9 667 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 CYSLTR2Q9NS75 346 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 PPP1R14DQ9NXH3 145 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 OR6C3Q9NZP0 311 aa5.44□□□□□ -1.54
NUP88-213ENST00000576862 IGLV5-52A0A0A0MRZ9 124 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 KRTAP29-1A8MX34 341 aaPredicted RBP5.43□□□□□ -1.54
NUP88-213ENST00000576862 LDLRAD4O15165 306 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 VNN2O95498 520 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 PRSS2P07478 247 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 PCNAP12004 261 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 COX7A2P14406 83 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 XBP1P17861 261 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 ABCD3P28288 659 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 GRIK3Q13003 919 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 SLC9B1Q4ZJI4 515 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 TXNDC8Q6A555 127 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 KIAA1161Q6NSJ0 714 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 FJX1Q86VR8 437 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 DHX40Q8IX18 779 aaKnown RBP5.43□□□□□ -1.54
NUP88-213ENST00000576862 FAM216AQ8WUB2 273 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 NUDCD2Q8WVJ2 157 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 ERGIC1Q969X5 290 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 MED30Q96HR3 178 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 TXNDC15Q96J42 360 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 MXRA8Q9BRK3 442 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 PAIP1Q9H074 479 aaKnown RBP5.43□□□□□ -1.54
NUP88-213ENST00000576862 CD93Q9NPY3 652 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 SELENONQ9NZV5 590 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 CARD8Q9Y2G2 431 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 NFE2L3Q9Y4A8 694 aa5.43□□□□□ -1.54
NUP88-213ENST00000576862 TEX13CA0A0J9YWL9 993 aa5.42□□□□□ -1.54
NUP88-213ENST00000576862 A0A1W2PQM1 296 aa5.42□□□□□ -1.54
NUP88-213ENST00000576862 LINC01553A4QN01 128 aa5.42□□□□□ -1.54
NUP88-213ENST00000576862 A6NLC8 198 aa5.42□□□□□ -1.54
NUP88-213ENST00000576862 CREB3O43889 395 aa5.42□□□□□ -1.54
NUP88-213ENST00000576862 F9P00740 461 aa5.42□□□□□ -1.54
NUP88-213ENST00000576862 C21orf33P30042 268 aaPredicted RBP5.42□□□□□ -1.54
NUP88-213ENST00000576862 PIGAP37287 484 aa5.42□□□□□ -1.54
NUP88-213ENST00000576862 COMPP49747 757 aaPredicted RBP5.42□□□□□ -1.54
NUP88-213ENST00000576862 PTP4A2Q12974 167 aa5.42□□□□□ -1.54
NUP88-213ENST00000576862 ARHGEF6Q15052 776 aa5.42□□□□□ -1.54
NUP88-213ENST00000576862 PLCB4Q15147 1175 aa5.42□□□□□ -1.54
NUP88-213ENST00000576862 ZNF324BQ6AW86 544 aaPredicted RBP5.42□□□□□ -1.54
NUP88-213ENST00000576862 TYW3Q6IPR3 259 aaKnown RBP5.42□□□□□ -1.54
NUP88-213ENST00000576862 CRELD2Q6UXH1 353 aaPredicted RBP5.42□□□□□ -1.54
NUP88-213ENST00000576862 H1FNTQ75WM6 255 aaPredicted RBP5.42□□□□□ -1.54
NUP88-213ENST00000576862 TMED6Q8WW62 240 aa5.42□□□□□ -1.54
NUP88-213ENST00000576862 RRP36Q96EU6 259 aaKnown RBP5.42□□□□□ -1.54
NUP88-213ENST00000576862 ZC3HAV1LQ96H79 300 aaKnown RBP5.42□□□□□ -1.54
NUP88-213ENST00000576862 KLHL15Q96M94 604 aa5.42□□□□□ -1.54
NUP88-213ENST00000576862 DDX4Q9NQI0 724 aaKnown RBP5.42□□□□□ -1.54
NUP88-213ENST00000576862 SMYD2Q9NRG4 433 aa5.42□□□□□ -1.54
NUP88-213ENST00000576862 LRP12Q9Y561 859 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms