RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 RP1P56715 2156 aa9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 URB1O60287 2271 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-212ENST00000573328 A0A1W2PQJ5 194 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 K7ESM1 405 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 SCAMP1O15126 338 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 LZTS3O60299 673 aaPredicted RBP9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 CAPNS1P04632 268 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 PRKCGP05129 697 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 SERPING1P05155 500 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 TPM3P06753 285 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 CKMT1AP12532 417 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 MYF5P13349 255 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 C6P13671 934 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 TIMP2P16035 220 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 PTMSP20962 102 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 GJC1P36383 396 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 SUOXP51687 545 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 E2F1Q01094 437 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 SEMG2Q02383 582 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 BCL2L1Q07817 233 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 KRT81Q14533 505 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 LRRC14Q15048 493 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 IRF4Q15306 451 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 UGP2Q16851 508 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 DEFB133Q30KQ1 61 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 PRRT3Q5FWE3 981 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 TPRG1LQ5T0D9 272 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 FAXCQ5TGI0 409 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 ZCCHC8Q6NZY4 707 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 BRAT1Q6PJG6 821 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 ARHGAP36Q6ZRI8 547 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 SRLQ86TD4 932 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 CAMK1DQ8IU85 385 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 PSTKQ8IV42 348 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 ARHGAP12Q8IWW6 846 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 PHACTR4Q8IZ21 702 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 RBFAQ8N0V3 343 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 ARFGAP1Q8N6T3 406 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 NPWQ8N729 165 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 TSEN2Q8NCE0 465 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 BTN2A2Q8WVV5 523 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 HNRNPLLQ8WVV9 542 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 ASB12Q8WXK4 309 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 TUBGCP5Q96RT8 1024 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 IL12RB2Q99665 862 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 NUP85Q9BW27 656 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 SLC13A1Q9BZW2 595 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 ABCG4Q9H172 646 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 ISCUQ9H1K1 167 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 PCDH12Q9NPG4 1184 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 GPR27Q9NS67 375 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 CWC15Q9P013 229 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 SPASTQ9UBP0 616 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 ANAPC7Q9UJX3 599 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 DOLKQ9UPQ8 538 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 ASXL3Q9C0F0 2248 aa9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 ZFC3H1O60293 1989 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-212ENST00000573328 ZFYVE26Q68DK2 2539 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 CPED1A4D0V7 1026 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 MT-CO3P00414 261 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 PCCBP05166 539 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 ELFN1P0C7U0 828 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 CTSEP14091 401 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 HTR1BP28222 390 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 SERPINB6P35237 376 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 PCK1P35558 622 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 EIF4A3P38919 411 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 MMP12P39900 470 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 RGRP47804 291 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 LIG3P49916 1009 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 SCNN1BP51168 640 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 RENBPP51606 427 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 PFN3P60673 137 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 YPEL5P62699 121 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 ZBED6P86452 979 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 INSM1Q01101 510 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 IL10RBQ08334 325 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 EIF2B5Q13144 721 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 C1orf61Q13536 156 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 DPYSQ14117 519 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 PIGHQ14442 188 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 RFTN1Q14699 578 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 ACAP1Q15027 740 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 TCEA2Q15560 299 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 DPYSL2Q16555 572 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 CDKN3Q16667 212 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 COL28A1Q2UY09 1125 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 TMEM52BQ4KMG9 183 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 TMCO4Q5TGY1 634 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 HGSNATQ68CP4 663 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 TMCO3Q6UWJ1 677 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 MACC1Q6ZN28 852 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 CYP4V2Q6ZWL3 525 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 BBS5Q8N3I7 341 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 ATPAF2Q8N5M1 289 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 LZTR1Q8N653 840 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 TP53I13Q8NBR0 393 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 IFI44Q8TCB0 444 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 HCAR2Q8TDS4 363 aa9.73□□□□□ -0.85
NPLOC4-212ENST00000573328 PDCD6IPQ8WUM4 868 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms