RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 CCDC172P0C7W6 258 aa18.29■□□□□ 0.52
CHD3-214ENST00000572579 GZMAP12544 262 aa18.29■□□□□ 0.52
CHD3-214ENST00000572579 ERCC2P18074 760 aa18.29■□□□□ 0.52
CHD3-214ENST00000572579 EIF2S3P41091 472 aaKnown RBP18.29■□□□□ 0.52
CHD3-214ENST00000572579 IRF4Q15306 451 aa18.29■□□□□ 0.52
CHD3-214ENST00000572579 CDKN3Q16667 212 aa18.29■□□□□ 0.52
CHD3-214ENST00000572579 UGP2Q16851 508 aa18.29■□□□□ 0.52
CHD3-214ENST00000572579 DEFB133Q30KQ1 61 aa18.29■□□□□ 0.52
CHD3-214ENST00000572579 CAVIN1Q6NZI2 390 aaKnown RBP18.29■□□□□ 0.52
CHD3-214ENST00000572579 GUSBP11Q6P575 273 aa18.29■□□□□ 0.52
CHD3-214ENST00000572579 LMX1AQ8TE12 382 aa18.29■□□□□ 0.52
CHD3-214ENST00000572579 DCBLD2Q96PD2 775 aa18.29■□□□□ 0.52
CHD3-214ENST00000572579 CWC15Q9P013 229 aaKnown RBP18.29■□□□□ 0.52
CHD3-214ENST00000572579 CNOT8Q9UFF9 292 aaKnown RBP18.29■□□□□ 0.52
CHD3-214ENST00000572579 IPO11Q9UI26 975 aaKnown RBP18.29■□□□□ 0.52
CHD3-214ENST00000572579 RAI2Q9Y5P3 530 aa18.29■□□□□ 0.52
CHD3-214ENST00000572579 FASNP49327 2511 aaKnown RBP18.28■□□□□ 0.52
CHD3-214ENST00000572579 TTC24A2A3L6 582 aaPredicted RBP18.28■□□□□ 0.52
CHD3-214ENST00000572579 NEMP2A6NFY4 417 aa18.28■□□□□ 0.52
CHD3-214ENST00000572579 EEF2KO00418 725 aaKnown RBP18.28■□□□□ 0.52
CHD3-214ENST00000572579 RIOK3O14730 519 aaKnown RBP18.28■□□□□ 0.52
CHD3-214ENST00000572579 AQP9O43315 295 aa18.28■□□□□ 0.52
CHD3-214ENST00000572579 TGM2P21980 687 aa18.28■□□□□ 0.52
CHD3-214ENST00000572579 HTR7P34969 479 aa18.28■□□□□ 0.52
CHD3-214ENST00000572579 EIF4A3P38919 411 aaKnown RBP18.28■□□□□ 0.52
CHD3-214ENST00000572579 ZNF165P49910 485 aa18.28■□□□□ 0.52
CHD3-214ENST00000572579 COL9A2Q14055 689 aaPredicted RBP18.28■□□□□ 0.52
CHD3-214ENST00000572579 DPYSQ14117 519 aa18.28■□□□□ 0.52
CHD3-214ENST00000572579 HGSNATQ68CP4 663 aa18.28■□□□□ 0.52
CHD3-214ENST00000572579 TXNRD3NBQ6F5E7 133 aa18.28■□□□□ 0.52
CHD3-214ENST00000572579 HCAR2Q8TDS4 363 aa18.28■□□□□ 0.52
CHD3-214ENST00000572579 FNIP1Q8TF40 1166 aa18.28■□□□□ 0.52
CHD3-214ENST00000572579 ARHGEF26Q96DR7 871 aa18.28■□□□□ 0.52
CHD3-214ENST00000572579 LRRC61Q9BV99 259 aa18.28■□□□□ 0.52
CHD3-214ENST00000572579 NAT10Q9H0A0 1025 aaKnown RBP18.28■□□□□ 0.52
CHD3-214ENST00000572579 ETNK2Q9NVF9 386 aa18.28■□□□□ 0.52
CHD3-214ENST00000572579 PEX11BO96011 259 aa18.27■□□□□ 0.52
CHD3-214ENST00000572579 C6P13671 934 aa18.27■□□□□ 0.52
CHD3-214ENST00000572579 GM2AP17900 193 aa18.27■□□□□ 0.52
CHD3-214ENST00000572579 PBX1P40424 430 aa18.27■□□□□ 0.52
CHD3-214ENST00000572579 ADKP55263 362 aaKnown RBP18.27■□□□□ 0.52
CHD3-214ENST00000572579 RAD51Q06609 339 aa18.27■□□□□ 0.52
CHD3-214ENST00000572579 RALGDSQ12967 914 aa18.27■□□□□ 0.52
CHD3-214ENST00000572579 PERM1Q5SV97 790 aa18.27■□□□□ 0.52
CHD3-214ENST00000572579 SRLQ86TD4 932 aa18.27■□□□□ 0.52
CHD3-214ENST00000572579 PHACTR4Q8IZ21 702 aa18.27■□□□□ 0.52
CHD3-214ENST00000572579 IFI44Q8TCB0 444 aa18.27■□□□□ 0.52
CHD3-214ENST00000572579 CXorf40AQ8TE69 158 aa18.27■□□□□ 0.52
CHD3-214ENST00000572579 DUSP23Q9BVJ7 150 aa18.27■□□□□ 0.52
CHD3-214ENST00000572579 BOCQ9BWV1 1114 aa18.27■□□□□ 0.52
CHD3-214ENST00000572579 ISCUQ9H1K1 167 aa18.27■□□□□ 0.52
CHD3-214ENST00000572579 EME2A4GXA9 379 aaPredicted RBP18.26■□□□□ 0.51
CHD3-214ENST00000572579 SMTNL1A8MU46 457 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 TRAFD1O14545 582 aaPredicted RBP18.26■□□□□ 0.51
CHD3-214ENST00000572579 TPP1O14773 563 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 YY2O15391 372 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 GP1BAP07359 652 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 ALPPL2P10696 532 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 TSHRP16473 764 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 MMP12P39900 470 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 CSNK1DP48730 415 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 LIG3P49916 1009 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 YPEL5P62699 121 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 KLHL30Q0D2K2 578 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 PRRT3Q5FWE3 981 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 ZCCHC8Q6NZY4 707 aaKnown RBP18.26■□□□□ 0.51
CHD3-214ENST00000572579 SLC35F3Q8IY50 421 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 PELI3Q8N2H9 469 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 PLA2G15Q8NCC3 412 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 ECHDC3Q96DC8 303 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 ZNF641Q96N77 438 aaPredicted RBP18.26■□□□□ 0.51
CHD3-214ENST00000572579 MYO1AQ9UBC5 1043 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 SALL4Q9UJQ4 1053 aa18.26■□□□□ 0.51
CHD3-214ENST00000572579 MYLKQ15746 1914 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 CPED1A4D0V7 1026 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 PMS2P1A4D2B8 440 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 ARHGAP42A6NI28 874 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 LMO7DNF2Z398 122 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 PALMO75781 387 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 MPOP05164 745 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 HCAR3P49019 387 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 SLC10A7Q0GE19 358 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 INPP5AQ14642 412 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 LRRC14Q15048 493 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 ALG11Q2TAA5 492 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 HS1BP3Q53T59 392 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 PPP6R3Q5H9R7 873 aaPredicted RBP18.25■□□□□ 0.51
CHD3-214ENST00000572579 CRTC1Q6UUV9 634 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 MACC1Q6ZN28 852 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 EFL1Q7Z2Z2 1120 aaKnown RBP18.25■□□□□ 0.51
CHD3-214ENST00000572579 SNIP1Q8TAD8 396 aaKnown RBP18.25■□□□□ 0.51
CHD3-214ENST00000572579 FGF11Q92914 225 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 TSACCQ96A04 125 aaPredicted RBP18.25■□□□□ 0.51
CHD3-214ENST00000572579 ZNF653Q96CK0 615 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 USP29Q9HBJ7 922 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 SPASTQ9UBP0 616 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 APOBEC3BQ9UH17 382 aaKnown RBP18.25■□□□□ 0.51
CHD3-214ENST00000572579 OR1A2Q9Y585 309 aa18.25■□□□□ 0.51
CHD3-214ENST00000572579 MGAQ8IWI9 3026 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 EIF3CLB5ME19 914 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms