RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 CAMK1DQ8IU85 385 aa13.78□□□□□ -0.2
PRPF8-202ENST00000571346 PSTKQ8IV42 348 aaKnown RBP13.78□□□□□ -0.2
PRPF8-202ENST00000571346 ARHGAP12Q8IWW6 846 aa13.78□□□□□ -0.2
PRPF8-202ENST00000571346 RBFAQ8N0V3 343 aa13.78□□□□□ -0.2
PRPF8-202ENST00000571346 PDCD7Q8N8D1 485 aaKnown RBP13.78□□□□□ -0.2
PRPF8-202ENST00000571346 LMX1AQ8TE12 382 aa13.78□□□□□ -0.2
PRPF8-202ENST00000571346 IFT43Q96FT9 208 aa13.78□□□□□ -0.2
PRPF8-202ENST00000571346 BTBD6Q96KE9 485 aa13.78□□□□□ -0.2
PRPF8-202ENST00000571346 NUP85Q9BW27 656 aa13.78□□□□□ -0.2
PRPF8-202ENST00000571346 CPEB1Q9BZB8 566 aaKnown RBP13.78□□□□□ -0.2
PRPF8-202ENST00000571346 ISCUQ9H1K1 167 aa13.78□□□□□ -0.2
PRPF8-202ENST00000571346 SUV39H2Q9H5I1 410 aa13.78□□□□□ -0.2
PRPF8-202ENST00000571346 PCDH12Q9NPG4 1184 aa13.78□□□□□ -0.2
PRPF8-202ENST00000571346 CWC15Q9P013 229 aaKnown RBP13.78□□□□□ -0.2
PRPF8-202ENST00000571346 APOBEC3BQ9UH17 382 aaKnown RBP13.78□□□□□ -0.2
PRPF8-202ENST00000571346 BZW2Q9Y6E2 419 aaKnown RBP13.78□□□□□ -0.2
PRPF8-202ENST00000571346 ARID1BQ8NFD5 2236 aaPredicted RBP13.78□□□□□ -0.2
PRPF8-202ENST00000571346 CAPNS1P04632 268 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 GYPCP04921 128 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 TPM3P06753 285 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 C6P13671 934 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 PTMSP20962 102 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 MMP12P39900 470 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 ZNF135P52742 658 aaPredicted RBP13.77□□□□□ -0.21
PRPF8-202ENST00000571346 PFN3P60673 137 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 ZBED6P86452 979 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 TARDBPQ13148 414 aaKnown RBP eCLIP13.77□□□□□ -0.21
PRPF8-202ENST00000571346 CAMK2BQ13554 666 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 PTK2BQ14289 1009 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 TCEA2Q15560 299 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 DPYSL2Q16555 572 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 UGP2Q16851 508 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 DEFB133Q30KQ1 61 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 AFMIDQ63HM1 303 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 BRAT1Q6PJG6 821 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 TMCO3Q6UWJ1 677 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 SRLQ86TD4 932 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 TP53INP2Q8IXH6 220 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 ATPAF2Q8N5M1 289 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 ASB12Q8WXK4 309 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 SYN2Q92777 582 aaPredicted RBP13.77□□□□□ -0.21
PRPF8-202ENST00000571346 APOLD1Q96LR9 279 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 TUBGCP5Q96RT8 1024 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 DUSP23Q9BVJ7 150 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 MBNL1Q9NR56 388 aaKnown RBP13.77□□□□□ -0.21
PRPF8-202ENST00000571346 EVA1BQ9NVM1 165 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 ATP8A1Q9Y2Q0 1164 aa13.77□□□□□ -0.21
PRPF8-202ENST00000571346 LUC7L2Q9Y383 392 aaKnown RBP13.77□□□□□ -0.21
PRPF8-202ENST00000571346 ACACAQ13085 2346 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 LRRK1Q38SD2 2015 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 A0A087X0T9 212 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 TSPAN11A1L157 253 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 K7ESM1 405 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 SCAMP1O15126 338 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 AQP9O43315 295 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 LZTS3O60299 673 aaPredicted RBP13.76□□□□□ -0.21
PRPF8-202ENST00000571346 BUB1BO60566 1050 aaPredicted RBP13.76□□□□□ -0.21
PRPF8-202ENST00000571346 PCCBP05166 539 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 FAM228BP0C875 321 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 GIMD1P0DJR0 217 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 CKMT1AP12532 417 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 LIG3P49916 1009 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 SUOXP51687 545 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 INSM1Q01101 510 aaPredicted RBP13.76□□□□□ -0.21
PRPF8-202ENST00000571346 BCL2L1Q07817 233 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 IL10RBQ08334 325 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 PIGHQ14442 188 aaPredicted RBP13.76□□□□□ -0.21
PRPF8-202ENST00000571346 KRT81Q14533 505 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 LRRC14Q15048 493 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 PRRT3Q5FWE3 981 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 TMCO4Q5TGY1 634 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 C19orf48Q6RUI8 117 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 MACC1Q6ZN28 852 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 ZSWIM9Q86XI8 627 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 PHACTR4Q8IZ21 702 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 LZTR1Q8N653 840 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 TP53I13Q8NBR0 393 aaPredicted RBP13.76□□□□□ -0.21
PRPF8-202ENST00000571346 CENPTQ96BT3 561 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 IQCDQ96DY2 449 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 ZNF641Q96N77 438 aaPredicted RBP13.76□□□□□ -0.21
PRPF8-202ENST00000571346 DCBLD2Q96PD2 775 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 CSPG4P5Q96PW8 444 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 TCEAL2Q9H3H9 227 aaPredicted RBP13.76□□□□□ -0.21
PRPF8-202ENST00000571346 ETNK2Q9NVF9 386 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 SEPT3Q9UH03 358 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 KLF15Q9UIH9 416 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 CAPN11Q9UMQ6 739 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 LHX6Q9UPM6 363 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 CLCA2Q9UQC9 943 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 AK5Q9Y6K8 562 aa13.76□□□□□ -0.21
PRPF8-202ENST00000571346 MYLKQ15746 1914 aa13.75□□□□□ -0.21
PRPF8-202ENST00000571346 MUSKO15146 869 aa13.75□□□□□ -0.21
PRPF8-202ENST00000571346 ELFN1P0C7U0 828 aa13.75□□□□□ -0.21
PRPF8-202ENST00000571346 RARAP10276 462 aa13.75□□□□□ -0.21
PRPF8-202ENST00000571346 AMPD1P23109 780 aa13.75□□□□□ -0.21
PRPF8-202ENST00000571346 CASP14P31944 242 aa13.75□□□□□ -0.21
PRPF8-202ENST00000571346 SERPINB6P35237 376 aa13.75□□□□□ -0.21
PRPF8-202ENST00000571346 HCAR3P49019 387 aa13.75□□□□□ -0.21
PRPF8-202ENST00000571346 SCNN1BP51168 640 aa13.75□□□□□ -0.21
PRPF8-202ENST00000571346 SLC25A11Q02978 314 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms