RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 SLC39A4Q6P5W5 647 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 CNKSR3Q6P9H4 555 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 BORAQ6PGQ7 559 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 KLHDC10Q6PID8 442 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 TRIM65Q6PJ69 517 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 WDR59Q6PJI9 974 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 MAMDC4Q6UXC1 1216 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ISLR2Q6UXK2 745 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ABHD15Q6UXT9 468 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ZNF704Q6ZNC4 412 aaPredicted RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 C16orf59Q7L2K0 433 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ARMCX2Q7L311 632 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ZNF720Q7Z2F6 126 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 GPR142Q7Z601 462 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 DNAAF5Q86Y56 855 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 RASAL3Q86YV0 1011 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 FAM217AQ8IXS0 508 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 CMIPQ8IY22 773 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 C4orf19Q8IY42 314 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 GPR161Q8N6U8 529 aaKnown RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 POGLUT1Q8NBL1 392 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 C3orf20Q8ND61 904 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 TRPV1Q8NER1 839 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 DNERQ8NFT8 737 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 OR52M1Q8NGK5 317 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ZNF671Q8TAW3 534 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 PLEKHO2Q8TD55 490 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 CALML6Q8TD86 181 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ASAP3Q8TDY4 903 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ZNF483Q8TF39 744 aaPredicted RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 TSPEARQ8WU66 669 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 AFG1LQ8WV93 481 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 LMBR1Q8WVP7 490 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 SLC13A3Q8WWT9 602 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 SLC9A6Q92581 669 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 PEX13Q92968 403 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 RFKQ969G6 155 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 NXPE3Q969Y0 559 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 TMEM143Q96AN5 459 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 LENG1Q96BZ8 264 aaPredicted RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 MIEF2Q96C03 454 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 C18orf8Q96DM3 657 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 RNF125Q96EQ8 232 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 PIWIL1Q96J94 861 aaKnown RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 CEP170P1Q96L14 293 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ERGIC2Q96RQ1 377 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 PKP4Q99569 1192 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 CBWD1Q9BRT8 395 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 APOL6Q9BWW8 343 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 FAM129AQ9BZQ8 928 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 SLC5A7Q9GZV3 580 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 KATNBL1Q9H079 304 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 THAP2Q9H0W7 228 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 POLR3FQ9H1D9 316 aaPredicted RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 CHRDQ9H2X0 955 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 PCIF1Q9H4Z3 704 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 SPACA1Q9HBV2 294 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 SEPSECSQ9HD40 501 aaKnown RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 SIX2Q9NPC8 291 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ZNF302Q9NR11 478 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 OLFML3Q9NRN5 406 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 FAM207AQ9NSI2 230 aaPredicted RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 ABHD10Q9NUJ1 306 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 EVA1BQ9NVM1 165 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 WWOXQ9NZC7 414 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 FLRT1Q9NZU1 646 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 MRPL15Q9P015 296 aaKnown RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 B4GALT6Q9UBX8 382 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 REV1Q9UBZ9 1251 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 TRIM10Q9UDY6 481 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 ATP6V1HQ9UI12 483 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 CPA4Q9UI42 421 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 DBR1Q9UK59 544 aaKnown RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 OGDHLQ9ULD0 1010 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 KIAA1257Q9ULG3 409 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 SNX6Q9UNH7 406 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 SMG5Q9UPR3 1016 aaKnown RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 SLC8A2Q9UPR5 921 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 PHF24Q9UPV7 400 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 STXBP5LQ9Y2K9 1186 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 SLC27A5Q9Y2P5 690 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 PPP2R2CQ9Y2T4 447 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 POLR3KQ9Y2Y1 108 aaPredicted RBP3.61□□□□□ -1.83
SMG6-208ENST00000570874 PCDHA10Q9Y5I2 948 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 LYVE1Q9Y5Y7 322 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 SPACA6W5XKT8 324 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 MICAL3Q7RTP6 2002 aa3.61□□□□□ -1.83
SMG6-208ENST00000570874 PATJQ8NI35 1801 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 TANC1Q9C0D5 1861 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 ALPK3Q96L96 1907 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 IGKV6D-21A0A0A0MT36 114 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 LOC100506127A0A0U1RQW1 187 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 A0A1W2PQC6 194 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 AQP12BA6NM10 295 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 LRRC53A6NM62 1247 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 FOXO6A8MYZ6 492 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 ZBTB42B2RXF5 422 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 F8W8V4 182 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 GOLGA8MH3BSY2 632 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 PDXKO00764 312 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms