RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 HSPA9P38646 679 aaKnown RBP13.15□□□□□ -0.3
CNOT1-220ENST00000569916 MMP12P39900 470 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 GARSP41250 739 aaKnown RBP13.15□□□□□ -0.3
CNOT1-220ENST00000569916 GRK6P43250 576 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 ARRB1P49407 418 aaPredicted RBP13.15□□□□□ -0.3
CNOT1-220ENST00000569916 SCNN1BP51168 640 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 BCL2L1Q07817 233 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 ELP6Q0PNE2 266 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 GALNT2Q10471 571 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 UGP2Q16851 508 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 TMEM52BQ4KMG9 183 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 KDM7AQ6ZMT4 941 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 KANSL1Q7Z3B3 1105 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 PTAR1Q7Z6K3 402 aaPredicted RBP13.15□□□□□ -0.3
CNOT1-220ENST00000569916 MAP7D3Q8IWC1 876 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 CCDC170Q8IYT3 715 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 DENND6BQ8NEG7 585 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 FAM174AQ8TBP5 190 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 CXorf40AQ8TE69 158 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 RHBDD1Q8TEB9 315 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 PANX2Q96RD6 677 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 MGME1Q9BQP7 344 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 WRAP53Q9BUR4 548 aaKnown RBP13.15□□□□□ -0.3
CNOT1-220ENST00000569916 PCDH12Q9NPG4 1184 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 LRP4O75096 1905 aa13.15□□□□□ -0.3
CNOT1-220ENST00000569916 TDRD6O60522 2096 aaKnown RBP13.14□□□□□ -0.31
CNOT1-220ENST00000569916 TTC24A2A3L6 582 aaPredicted RBP13.14□□□□□ -0.31
CNOT1-220ENST00000569916 LRRD1A4D1F6 860 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 C3orf70A6NLC5 250 aaPredicted RBP13.14□□□□□ -0.31
CNOT1-220ENST00000569916 ZNF487B1APH4 448 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 TRAFD1O14545 582 aaPredicted RBP13.14□□□□□ -0.31
CNOT1-220ENST00000569916 RIOK3O14730 519 aaKnown RBP13.14□□□□□ -0.31
CNOT1-220ENST00000569916 TM7SF2O76062 418 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 PRKCGP05129 697 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 ITGAVP06756 1048 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 FTH1P19P0C7X4 201 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 IGFALSP35858 605 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 MAGEA1P43355 309 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 MMP13P45452 471 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 HADHBP55084 474 aaKnown RBP13.14□□□□□ -0.31
CNOT1-220ENST00000569916 GBE1Q04446 702 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 BNIP3Q12983 259 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 SGCGQ13326 291 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 INAVAQ3KP66 663 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 ZFYVE27Q5T4F4 411 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 CFAP58Q5T655 872 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 MARC1Q5VT66 337 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 Q6ZSR6 202 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 VSIG1Q86XK7 387 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 LRRC49Q8IUZ0 686 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 TEX26Q8N6G2 289 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 CENPTQ96BT3 561 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 RNF157Q96PX1 679 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 NUDCD1Q96RS6 583 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 CDC6Q99741 560 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 TOR4AQ9NXH8 423 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 TFR2Q9UP52 801 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 ATP8A1Q9Y2Q0 1164 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 HYOU1Q9Y4L1 999 aa13.14□□□□□ -0.31
CNOT1-220ENST00000569916 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.13□□□□□ -0.31
CNOT1-220ENST00000569916 SOWAHDA6NJG2 315 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 FPGTO14772 594 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 HTRA2O43464 458 aaPredicted RBP13.13□□□□□ -0.31
CNOT1-220ENST00000569916 HYAL3O43820 417 aaPredicted RBP13.13□□□□□ -0.31
CNOT1-220ENST00000569916 SDC3O75056 442 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 SOCS5O75159 536 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 KRT1P04264 644 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 C6P13671 934 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 SPINK2P20155 84 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 CYLC1P35663 651 aaPredicted RBP13.13□□□□□ -0.31
CNOT1-220ENST00000569916 SLC1A1P43005 524 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 PFN3P60673 137 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 MAXP61244 160 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 SLC10A2Q12908 348 aaPredicted RBP13.13□□□□□ -0.31
CNOT1-220ENST00000569916 RALGDSQ12967 914 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 TPRG1LQ5T0D9 272 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 LRRC38Q5VT99 294 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 ERAP2Q6P179 960 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 DCP2Q8IU60 420 aaKnown RBP13.13□□□□□ -0.31
CNOT1-220ENST00000569916 BBS5Q8N3I7 341 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 TP53I13Q8NBR0 393 aaPredicted RBP13.13□□□□□ -0.31
CNOT1-220ENST00000569916 NSMCE1Q8WV22 266 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 SPOCK2Q92563 424 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 MAML1Q92585 1016 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 CAAP1Q9H8G2 361 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 SCUBE2Q9NQ36 999 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 COQ6Q9Y2Z9 468 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 PCDHA13Q9Y5I0 950 aa13.13□□□□□ -0.31
CNOT1-220ENST00000569916 MATN3O15232 486 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 TNFSF14O43557 240 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 DKK1O94907 266 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 TRIM16O95361 564 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 ATXN1LP0C7T5 689 aaKnown RBP13.12□□□□□ -0.31
CNOT1-220ENST00000569916 COMTP21964 271 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 RABIFP47224 123 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 SEMG2Q02383 582 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 TRAF2Q12933 501 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 FZD2Q14332 565 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 IRF4Q15306 451 aa13.12□□□□□ -0.31
CNOT1-220ENST00000569916 IFI16Q16666 785 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms