RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 LMX1AQ8TE12 382 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 HAUS4Q9H6D7 363 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 PCDH12Q9NPG4 1184 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 UBA2Q9UBT2 640 aaPredicted RBP13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 PCSK1NQ9UHG2 260 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 AK5Q9Y6K8 562 aa13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 HELZ2Q9BYK8 2649 aaKnown RBP13.99□□□□□ -0.17
GTF3C1-211ENST00000569653 FGF10O15520 208 aaPredicted RBP13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 AQP9O43315 295 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 GM2AP17900 193 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 TNFAIP3P21580 790 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 PSMA2P25787 234 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 MIPP30301 263 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 PAPOLAP51003 745 aaKnown RBP13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 AIF1P55008 147 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 TPM4P67936 248 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 E2F1Q01094 437 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 RALGDSQ12967 914 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 ZSCAN23Q3MJ62 389 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 CAMK1DQ8IU85 385 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 SLC35F3Q8IY50 421 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 PHACTR4Q8IZ21 702 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 TSEN2Q8NCE0 465 aaKnown RBP13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 IFI44Q8TCB0 444 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 CASKIN2Q8WXE0 1202 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 BOCQ9BWV1 1114 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 CPEB1Q9BZB8 566 aaKnown RBP13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 DHX35Q9H5Z1 703 aaKnown RBP13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 CATSPERBQ9H7T0 1116 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 MYO6Q9UM54 1294 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 CSNK1G3Q9Y6M4 447 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 SCN8AQ9UQD0 1980 aa13.98□□□□□ -0.17
GTF3C1-211ENST00000569653 UNC13CQ8NB66 2214 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 A0A1B0GTH6 734 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 TTC24A2A3L6 582 aaPredicted RBP13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 LZTS3O60299 673 aaPredicted RBP13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 CSO75390 466 aaKnown RBP13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 LRCH4O75427 683 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 TM7SF2O76062 418 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 MPOP05164 745 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 GP1BAP07359 652 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 SKILP12757 684 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 C6P13671 934 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 ERCC2P18074 760 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 IL1R2P27930 398 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 EIF4A3P38919 411 aaKnown RBP13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 MMP12P39900 470 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 PRKCIP41743 596 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 PDX1P52945 283 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 DPYSQ14117 519 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 IQCB1Q15051 598 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 TCEA2Q15560 299 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 ASIC2Q16515 512 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 UGP2Q16851 508 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 ALG11Q2TAA5 492 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 TBC1D25Q3MII6 688 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 PRRT3Q5FWE3 981 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 TXNRD3NBQ6F5E7 133 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 ZCCHC8Q6NZY4 707 aaKnown RBP13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 MACC1Q6ZN28 852 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 RFX8Q6ZV50 586 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 EFL1Q7Z2Z2 1120 aaKnown RBP13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 ZSCAN30Q86W11 494 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 PELI3Q8N2H9 469 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 VCPIP1Q96JH7 1222 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 SUV39H2Q9H5I1 410 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 PRORYQ9H606 182 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 AIPL1Q9NZN9 384 aa13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 APOBEC3BQ9UH17 382 aaKnown RBP13.97□□□□□ -0.17
GTF3C1-211ENST00000569653 CPED1A4D0V7 1026 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 EME2A4GXA9 379 aaPredicted RBP13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 NEMP2A6NFY4 417 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 EEF2KO00418 725 aaKnown RBP13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 RIOK3O14730 519 aaKnown RBP13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 PEX11BO96011 259 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 FTLP02792 175 aaPredicted RBP13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 ALPPL2P10696 532 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 TSHRP16473 764 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 ABCG1P45844 678 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 NDST2P52849 883 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 ADKP55263 362 aaKnown RBP13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 SFTPA2Q8IWL1 248 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 PLA2G15Q8NCC3 412 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 CXorf40AQ8TE69 158 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 ECHDC3Q96DC8 303 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 ARHGEF26Q96DR7 871 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 DUSP23Q9BVJ7 150 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 ASCL3Q9NQ33 180 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 PARVAQ9NVD7 372 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 ETNK2Q9NVF9 386 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 CWC15Q9P013 229 aaKnown RBP13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 CNOT8Q9UFF9 292 aaKnown RBP13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 IPO11Q9UI26 975 aaKnown RBP13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 RABGEF1Q9UJ41 708 aa13.96□□□□□ -0.17
GTF3C1-211ENST00000569653 ANKRD62A6NC57 917 aa13.95□□□□□ -0.18
GTF3C1-211ENST00000569653 LMO7DNF2Z398 122 aa13.95□□□□□ -0.18
GTF3C1-211ENST00000569653 H3BM21 787 aa13.95□□□□□ -0.18
GTF3C1-211ENST00000569653 TPP1O14773 563 aa13.95□□□□□ -0.18
GTF3C1-211ENST00000569653 YY2O15391 372 aa13.95□□□□□ -0.18
GTF3C1-211ENST00000569653 USP12O75317 370 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms