RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 FSCN3Q9NQT6 498 aa6.37□□□□□ -1.39
LINC00556-201ENST00000569603 DNAJC17Q9NVM6 304 aaKnown RBP6.37□□□□□ -1.39
LINC00556-201ENST00000569603 PIH1D1Q9NWS0 290 aaKnown RBP6.37□□□□□ -1.39
LINC00556-201ENST00000569603 WDR35Q9P2L0 1181 aa6.37□□□□□ -1.39
LINC00556-201ENST00000569603 THAP10Q9P2Z0 257 aaPredicted RBP6.37□□□□□ -1.39
LINC00556-201ENST00000569603 NUDT5Q9UKK9 219 aa6.37□□□□□ -1.39
LINC00556-201ENST00000569603 PHTF1Q9UMS5 762 aa6.37□□□□□ -1.39
LINC00556-201ENST00000569603 DMTF1Q9Y222 760 aa6.37□□□□□ -1.39
LINC00556-201ENST00000569603 NFE2L3Q9Y4A8 694 aa6.37□□□□□ -1.39
LINC00556-201ENST00000569603 PCDHGB3Q9Y5G1 929 aa6.37□□□□□ -1.39
LINC00556-201ENST00000569603 SPTA1P02549 2419 aa6.37□□□□□ -1.39
LINC00556-201ENST00000569603 TP53BP1Q12888 1972 aaPredicted RBP6.37□□□□□ -1.39
LINC00556-201ENST00000569603 TMEM131Q92545 1883 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 ATXN2Q99700 1313 aaKnown RBP6.36□□□□□ -1.39
LINC00556-201ENST00000569603 KCNJ18B7U540 433 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 MUSKO15146 869 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 CALUO43852 315 aaPredicted RBP6.36□□□□□ -1.39
LINC00556-201ENST00000569603 CBFA2T3O75081 653 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 GFPT2O94808 682 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 IGLV3-27P01718 113 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 GALNSP34059 522 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 PSMC2P35998 433 aaKnown RBP6.36□□□□□ -1.39
LINC00556-201ENST00000569603 DPP6P42658 865 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 IL12RB1P42701 662 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 WASP42768 502 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 SYKP43405 635 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 PMS1P54277 932 aaKnown RBP6.36□□□□□ -1.39
LINC00556-201ENST00000569603 SESN3P58005 492 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 RPL6Q02878 288 aaKnown RBP6.36□□□□□ -1.39
LINC00556-201ENST00000569603 ZNF33AQ06730 810 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 ADAM9Q13443 819 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 BYSLQ13895 437 aaKnown RBP6.36□□□□□ -1.39
LINC00556-201ENST00000569603 DUOXA1Q1HG43 343 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 ANO4Q32M45 955 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 FUT11Q495W5 492 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 PREPLQ4J6C6 727 aaPredicted RBP6.36□□□□□ -1.39
LINC00556-201ENST00000569603 FILIP1LQ4L180 1135 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 CBWD6Q4V339 395 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 CBWD3Q5JTY5 395 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 CBWD5Q5RIA9 395 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 C10orf120Q5SQS8 335 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 BTBD8Q5XKL5 378 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 KRT39Q6A163 491 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 UNQ6494/PRO21346Q6UXR6 183 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 SLC36A4Q6YBV0 504 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 DBX2Q6ZNG2 339 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 TPGS1Q6ZTW0 290 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 SCML4Q8N228 414 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 AFAP1L2Q8N4X5 818 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 FAM26EQ8N5C1 309 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.36□□□□□ -1.39
LINC00556-201ENST00000569603 ANKRD52Q8NB46 1076 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 FBXL13Q8NEE6 735 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 DEFB124Q8NES8 71 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 ENGASEQ8NFI3 743 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 BAHD1Q8TBE0 780 aaPredicted RBP6.36□□□□□ -1.39
LINC00556-201ENST00000569603 BRSK1Q8TDC3 778 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 NINJ1Q92982 152 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 SLC35C1Q96A29 364 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 EEF2KMTQ96G04 330 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 RMDN2Q96LZ7 410 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 ORAI3Q9BRQ5 295 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 CISHQ9NSE2 258 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 IRAK4Q9NWZ3 460 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 NKIRAS2Q9NYR9 191 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 PLK2Q9NYY3 685 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 PPARGC1AQ9UBK2 798 aaKnown RBP6.36□□□□□ -1.39
LINC00556-201ENST00000569603 AGO1Q9UL18 857 aaKnown RBP6.36□□□□□ -1.39
LINC00556-201ENST00000569603 EFR3BQ9Y2G0 817 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 RAD54BQ9Y620 910 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 SLCO1B1Q9Y6L6 691 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 NYNRINQ9P2P1 1898 aaKnown RBP6.36□□□□□ -1.39
LINC00556-201ENST00000569603 AHCTF1Q8WYP5 2266 aa6.36□□□□□ -1.39
LINC00556-201ENST00000569603 BSNQ9UPA5 3926 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 C2orf81A6NN90 581 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 TAF4O00268 1085 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 O00370 1275 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 NPC1O15118 1278 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 PMM2O15305 246 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 AP5Z1O43299 807 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 ZNF217O75362 1048 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 ZNF202O95125 648 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 MTHFD1P11586 935 aaKnown RBP6.35□□□□□ -1.39
LINC00556-201ENST00000569603 KRT13P13646 458 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 CPEP16870 476 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 CD58P19256 250 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 PRKCHP24723 683 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 RPL13P26373 211 aaKnown RBP6.35□□□□□ -1.39
LINC00556-201ENST00000569603 HOXD9P28356 352 aaPredicted RBP6.35□□□□□ -1.39
LINC00556-201ENST00000569603 TPP2P29144 1249 aaPredicted RBP6.35□□□□□ -1.39
LINC00556-201ENST00000569603 HLA-FP30511 346 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 CORO1AP31146 461 aaKnown RBP6.35□□□□□ -1.39
LINC00556-201ENST00000569603 RPL34P49207 117 aaKnown RBP6.35□□□□□ -1.39
LINC00556-201ENST00000569603 MXI1P50539 228 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 TPMTP51580 245 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 CSE1LP55060 971 aaKnown RBP6.35□□□□□ -1.39
LINC00556-201ENST00000569603 RPS26P62854 115 aaKnown RBP6.35□□□□□ -1.39
LINC00556-201ENST00000569603 KRT85P78386 507 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 ITKQ08881 620 aa6.35□□□□□ -1.39
LINC00556-201ENST00000569603 CAMK2GQ13555 558 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms