RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 ISCUQ9H1K1 167 aa18.78■□□□□ 0.6
CPNE7-209ENST00000568977 SUV39H2Q9H5I1 410 aa18.78■□□□□ 0.6
CPNE7-209ENST00000568977 MRPL47Q9HD33 250 aaKnown RBP18.78■□□□□ 0.6
CPNE7-209ENST00000568977 MBNL1Q9NR56 388 aaKnown RBP18.78■□□□□ 0.6
CPNE7-209ENST00000568977 U3KQA8 63 aa18.78■□□□□ 0.6
CPNE7-209ENST00000568977 DFFAO00273 331 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 AQP9O43315 295 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 ZNF135P52742 658 aaPredicted RBP18.77■□□□□ 0.6
CPNE7-209ENST00000568977 FANCCQ00597 558 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 DPYSQ14117 519 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 IRF4Q15306 451 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 UGP2Q16851 508 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 COL28A1Q2UY09 1125 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 TMEM52BQ4KMG9 183 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 HGSNATQ68CP4 663 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 ZCCHC8Q6NZY4 707 aaKnown RBP18.77■□□□□ 0.6
CPNE7-209ENST00000568977 ARHGAP36Q6ZRI8 547 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 ZSWIM9Q86XI8 627 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 CACTIN-AS1Q8N1I8 211 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 DCBLD1Q8N8Z6 715 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 HCAR2Q8TDS4 363 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 ZNF641Q96N77 438 aaPredicted RBP18.77■□□□□ 0.6
CPNE7-209ENST00000568977 CINPQ9BW66 212 aaPredicted RBP18.77■□□□□ 0.6
CPNE7-209ENST00000568977 NRSN2Q9GZP1 204 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 USP29Q9HBJ7 922 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 PCDH12Q9NPG4 1184 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 SCUBE2Q9NQ36 999 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 EVA1BQ9NVM1 165 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 CWC15Q9P013 229 aaKnown RBP18.77■□□□□ 0.6
CPNE7-209ENST00000568977 APOBEC3BQ9UH17 382 aaKnown RBP18.77■□□□□ 0.6
CPNE7-209ENST00000568977 COQ6Q9Y2Z9 468 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 CSNK1G3Q9Y6M4 447 aa18.77■□□□□ 0.6
CPNE7-209ENST00000568977 LRP4O75096 1905 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 A0A1W2PQJ5 194 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 PALMO75781 387 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 C6P13671 934 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 IL1R2P27930 398 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 PCK1P35558 622 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 MMP12P39900 470 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 PBX1P40424 430 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 CSNK1DP48730 415 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 YPEL5P62699 121 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 RTP5Q14D33 572 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 SMTNL2Q2TAL5 461 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 ERAP2Q6P179 960 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 BRAT1Q6PJG6 821 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 MACC1Q6ZN28 852 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 CAMK1DQ8IU85 385 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 PHACTR4Q8IZ21 702 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 LMX1AQ8TE12 382 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 BTN2A2Q8WVV5 523 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 HNRNPLLQ8WVV9 542 aaKnown RBP18.76■□□□□ 0.59
CPNE7-209ENST00000568977 TCEAL2Q9H3H9 227 aaPredicted RBP18.76■□□□□ 0.59
CPNE7-209ENST00000568977 ATP13A3Q9H7F0 1226 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 ZWILCHQ9H900 591 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 PNMA8BQ9ULN7 279 aaPredicted RBP18.76■□□□□ 0.59
CPNE7-209ENST00000568977 ATP8A1Q9Y2Q0 1164 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 AK5Q9Y6K8 562 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 LAMA5O15230 3695 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 ASXL3Q9C0F0 2248 aa18.76■□□□□ 0.59
CPNE7-209ENST00000568977 H3BRJ5 948 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 TOR1BO14657 336 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 RIOK3O14730 519 aaKnown RBP18.75■□□□□ 0.59
CPNE7-209ENST00000568977 OPA1O60313 960 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 BUB1BO60566 1050 aaPredicted RBP18.75■□□□□ 0.59
CPNE7-209ENST00000568977 PRKCGP05129 697 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 GP1BAP07359 652 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 TCF4P15884 667 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 SERPINA4P29622 427 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 EIF4A3P38919 411 aaKnown RBP18.75■□□□□ 0.59
CPNE7-209ENST00000568977 HCAR3P49019 387 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 DUSP3P51452 185 aaPredicted RBP18.75■□□□□ 0.59
CPNE7-209ENST00000568977 SEMG2Q02383 582 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 IL10RBQ08334 325 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 LRRC14Q15048 493 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 DPYSL2Q16555 572 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 DEFB133Q30KQ1 61 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 SRLQ86TD4 932 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 TP53INP2Q8IXH6 220 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.75■□□□□ 0.59
CPNE7-209ENST00000568977 LRRC61Q9BV99 259 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 SPASTQ9UBP0 616 aa18.75■□□□□ 0.59
CPNE7-209ENST00000568977 SHROOM3Q8TF72 1996 aa18.74■□□□□ 0.59
CPNE7-209ENST00000568977 COL27A1Q8IZC6 1860 aaPredicted RBP18.74■□□□□ 0.59
CPNE7-209ENST00000568977 A0A087WV48 116 aa18.74■□□□□ 0.59
CPNE7-209ENST00000568977 MUSKO15146 869 aa18.74■□□□□ 0.59
CPNE7-209ENST00000568977 MT-CO3P00414 261 aa18.74■□□□□ 0.59
CPNE7-209ENST00000568977 ARL4AP40617 200 aa18.74■□□□□ 0.59
CPNE7-209ENST00000568977 UBASH3AP57075 661 aa18.74■□□□□ 0.59
CPNE7-209ENST00000568977 RFTN1Q14699 578 aaPredicted RBP18.74■□□□□ 0.59
CPNE7-209ENST00000568977 ACAP1Q15027 740 aa18.74■□□□□ 0.59
CPNE7-209ENST00000568977 CDKN3Q16667 212 aa18.74■□□□□ 0.59
CPNE7-209ENST00000568977 WSCD2Q2TBF2 565 aa18.74■□□□□ 0.59
CPNE7-209ENST00000568977 PRRT3Q5FWE3 981 aa18.74■□□□□ 0.59
CPNE7-209ENST00000568977 PDZD3Q86UT5 571 aa18.74■□□□□ 0.59
CPNE7-209ENST00000568977 LZTR1Q8N653 840 aa18.74■□□□□ 0.59
CPNE7-209ENST00000568977 IFI44Q8TCB0 444 aa18.74■□□□□ 0.59
CPNE7-209ENST00000568977 HSPH1Q92598 858 aa18.74■□□□□ 0.59
CPNE7-209ENST00000568977 SYN2Q92777 582 aaPredicted RBP18.74■□□□□ 0.59
CPNE7-209ENST00000568977 ECHDC3Q96DC8 303 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms