RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 LRRN3Q9H3W5 708 aa15.03■□□□□ -0
USB1-214ENST00000568848 NOL6Q9H6R4 1146 aaKnown RBP15.03■□□□□ -0
USB1-214ENST00000568848 STARD5Q9NSY2 213 aa15.03■□□□□ -0
USB1-214ENST00000568848 TMEM59LQ9UK28 342 aa15.03■□□□□ -0
USB1-214ENST00000568848 FHOD1Q9Y613 1164 aa15.03■□□□□ -0
USB1-214ENST00000568848 UTP20O75691 2785 aaKnown RBP15.03■□□□□ -0
USB1-214ENST00000568848 TMCC1O94876 653 aa15.02■□□□□ -0
USB1-214ENST00000568848 GNA14O95837 355 aa15.02■□□□□ -0
USB1-214ENST00000568848 HK3P52790 923 aa15.02■□□□□ -0
USB1-214ENST00000568848 RAPGEF1Q13905 1077 aa15.02■□□□□ -0
USB1-214ENST00000568848 MANEALQ5VSG8 457 aa15.02■□□□□ -0
USB1-214ENST00000568848 NAA35Q5VZE5 725 aa15.02■□□□□ -0
USB1-214ENST00000568848 NOP9Q86U38 636 aaKnown RBP15.02■□□□□ -0
USB1-214ENST00000568848 ZSWIM9Q86XI8 627 aa15.02■□□□□ -0
USB1-214ENST00000568848 ZNF354CQ86Y25 554 aa15.02■□□□□ -0
USB1-214ENST00000568848 PYROXD2Q8N2H3 581 aa15.02■□□□□ -0
USB1-214ENST00000568848 PELI3Q8N2H9 469 aa15.02■□□□□ -0
USB1-214ENST00000568848 FAM174AQ8TBP5 190 aa15.02■□□□□ -0
USB1-214ENST00000568848 GPT2Q8TD30 523 aa15.02■□□□□ -0
USB1-214ENST00000568848 GLMNQ92990 594 aa15.02■□□□□ -0
USB1-214ENST00000568848 C18orf8Q96DM3 657 aa15.02■□□□□ -0
USB1-214ENST00000568848 RNF31Q96EP0 1072 aa15.02■□□□□ -0
USB1-214ENST00000568848 C1orf74Q96LT6 269 aa15.02■□□□□ -0
USB1-214ENST00000568848 EDEM3Q9BZQ6 932 aa15.02■□□□□ -0
USB1-214ENST00000568848 PDCL3Q9H2J4 239 aa15.02■□□□□ -0
USB1-214ENST00000568848 SEMA6CQ9H3T2 930 aa15.02■□□□□ -0
USB1-214ENST00000568848 NCKIPSDQ9NZQ3 722 aa15.02■□□□□ -0
USB1-214ENST00000568848 DAAM1Q9Y4D1 1078 aa15.02■□□□□ -0
USB1-214ENST00000568848 B4DGG1 531 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 C9orf172C9J069 976 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 BUB1O43683 1085 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 MMEP08473 750 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 JMJD7P0C870 316 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 CCL4P13236 92 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 CTSEP14091 401 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 PTK2BQ14289 1009 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 INPP5AQ14642 412 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 C16orf72Q14CZ0 275 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 FOXR2Q6PJQ5 311 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 LURAP1LQ8IV03 231 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 CCNJLQ8IV13 435 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 FAM71AQ8IYT1 594 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 SLC20A1Q8WUM9 679 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 OR1E3Q8WZA6 343 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 HAPLN3Q96S86 360 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 RDH14Q9HBH5 336 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 RNF215Q9Y6U7 377 aa15.01□□□□□ -0.01
USB1-214ENST00000568848 ARHGEF17Q96PE2 2063 aaPredicted RBP15.01□□□□□ -0.01
USB1-214ENST00000568848 TMEM202A6NGA9 273 aa15□□□□□ -0.01
USB1-214ENST00000568848 SUV39H1O43463 412 aa15□□□□□ -0.01
USB1-214ENST00000568848 LRIG2O94898 1065 aa15□□□□□ -0.01
USB1-214ENST00000568848 GSRP00390 522 aa15□□□□□ -0.01
USB1-214ENST00000568848 CYP11B1P15538 503 aa15□□□□□ -0.01
USB1-214ENST00000568848 GABRB2P47870 512 aa15□□□□□ -0.01
USB1-214ENST00000568848 ARSDP51689 593 aa15□□□□□ -0.01
USB1-214ENST00000568848 MAZP56270 477 aaKnown RBP15□□□□□ -0.01
USB1-214ENST00000568848 SRP54P61011 504 aaKnown RBP15□□□□□ -0.01
USB1-214ENST00000568848 SNRPD1P62314 119 aaKnown RBP15□□□□□ -0.01
USB1-214ENST00000568848 SKIDA1Q1XH10 827 aa15□□□□□ -0.01
USB1-214ENST00000568848 CCDC14Q49A88 953 aa15□□□□□ -0.01
USB1-214ENST00000568848 MANEAQ5SRI9 462 aa15□□□□□ -0.01
USB1-214ENST00000568848 PHF19Q5T6S3 580 aa15□□□□□ -0.01
USB1-214ENST00000568848 ZNF783Q6ZMS7 281 aa15□□□□□ -0.01
USB1-214ENST00000568848 TMEM35BQ8NCS4 154 aa15□□□□□ -0.01
USB1-214ENST00000568848 RCBTB1Q8NDN9 531 aa15□□□□□ -0.01
USB1-214ENST00000568848 PTCD2Q8WV60 388 aaKnown RBP15□□□□□ -0.01
USB1-214ENST00000568848 RXFP2Q8WXD0 754 aa15□□□□□ -0.01
USB1-214ENST00000568848 ASB12Q8WXK4 309 aa15□□□□□ -0.01
USB1-214ENST00000568848 RAB7BQ96AH8 199 aa15□□□□□ -0.01
USB1-214ENST00000568848 FUCA2Q9BTY2 467 aa15□□□□□ -0.01
USB1-214ENST00000568848 APOOQ9BUR5 198 aa15□□□□□ -0.01
USB1-214ENST00000568848 FGF22Q9HCT0 170 aa15□□□□□ -0.01
USB1-214ENST00000568848 KLQ9UEF7 1012 aa15□□□□□ -0.01
USB1-214ENST00000568848 OR12D3Q9UGF7 316 aa15□□□□□ -0.01
USB1-214ENST00000568848 HOOK1Q9UJC3 728 aaKnown RBP15□□□□□ -0.01
USB1-214ENST00000568848 PCDHGA7Q9Y5G6 932 aa15□□□□□ -0.01
USB1-214ENST00000568848 A8MX80 341 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 RASGRP1O95267 797 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 POP4O95707 220 aaKnown RBP14.99□□□□□ -0.01
USB1-214ENST00000568848 F9P00740 461 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 LIPCP11150 499 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 CDH5P33151 784 aaPredicted RBP14.99□□□□□ -0.01
USB1-214ENST00000568848 ADRA1BP35368 520 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 MTIF2P46199 727 aaKnown RBP14.99□□□□□ -0.01
USB1-214ENST00000568848 RGRP47804 291 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 TLE1Q04724 770 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 SLC20A2Q08357 652 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 NFATC4Q14934 902 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 LRRC14Q15048 493 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 POLD3Q15054 466 aaPredicted RBP14.99□□□□□ -0.01
USB1-214ENST00000568848 IGFBP7Q16270 282 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 CAMK4Q16566 473 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 AMZ1Q400G9 498 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 ATG14Q6ZNE5 492 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 SLC30A5Q8TAD4 765 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 ISG20Q96AZ6 181 aaKnown RBP14.99□□□□□ -0.01
USB1-214ENST00000568848 GRAMD1AQ96CP6 724 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 HMCESQ96FZ2 354 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 STRADBQ9C0K7 418 aa14.99□□□□□ -0.01
USB1-214ENST00000568848 TMEM168Q9H0V1 697 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms