RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	FAM71A	Q8IYT1	594 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	TMEM35B	Q8NCS4	154 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	TSACC	Q96A04	125 aa	Predicted RBP	11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	CPEB1	Q9BZB8	566 aa	Known RBP	11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	MAGEH1	Q9H213	219 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	RETREG1	Q9H6L5	497 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	NDFIP2	Q9NV92	336 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	SIRPG	Q9P1W8	387 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	DKK3	Q9UBP4	350 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	PISD	Q9UG56	409 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	TMEM59L	Q9UK28	342 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	DNAJC12	Q9UKB3	198 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	GPR34	Q9UPC5	381 aa		11.52	□□□□□ -0.57
TCF4-238	ENST00000568169	UBR5	O95071	2799 aa	Predicted RBP	11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	BIN1	O00499	593 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	JMJD7	P0C870	316 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	PNMA6A	P0CW24	399 aa	Predicted RBP	11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	CTSE	P14091	401 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	TIMP2	P16035	220 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	ITIH2	P19823	946 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	MAPKAPK2	P49137	400 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	BPIFB4	P59827	614 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	TBR1	Q16650	682 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	WSCD2	Q2TBF2	565 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	TMEM52B	Q4KMG9	183 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	NLRP14	Q86W24	1093 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	GKN2	Q86XP6	184 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	GPR156	Q8NFN8	814 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	OR6C4	Q8NGE1	309 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	CXorf40A	Q8TE69	158 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	TMEM159	Q96B96	161 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	CFAP57	Q96MR6	1250 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	TMEM248	Q9NWD8	314 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	SEPT10	Q9P0V9	454 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	HPCAL4	Q9UM19	191 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	LOXL2	Q9Y4K0	774 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	PCDHGA4	Q9Y5G9	962 aa		11.51	□□□□□ -0.57
TCF4-238	ENST00000568169	PRAMEF33	A0A0G2JMD5	474 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	KDELR3	O43731	214 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	PRAMEF10	O60809	474 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	RHOQ	P17081	205 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	WT1	P19544	449 aa	Predicted RBP	11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	ITIH1	P19827	911 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	ADRA1B	P35368	520 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	ETV5	P41161	510 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	SUOX	P51687	545 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	SRP54	P61011	504 aa	Known RBP	11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	NFATC4	Q14934	902 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	LRRC14	Q15048	493 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	MANEA	Q5SRI9	462 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	OGFOD3	Q6PK18	319 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	ENPP7	Q6UWV6	458 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	LEKR1	Q6ZMV7	388 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	NYAP1	Q6ZVC0	841 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	RD3	Q7Z3Z2	195 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	VASH2	Q86V25	355 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	ZFAND4	Q86XD8	727 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	DTX1	Q86Y01	620 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	IRF2BP1	Q8IU81	584 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	CCNJL	Q8IV13	435 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	GDAP1L1	Q96MZ0	367 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	WRAP53	Q9BUR4	548 aa	Known RBP	11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	APOO	Q9BUR5	198 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	TTYH3	Q9C0H2	523 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	OR12D3	Q9UGF7	316 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	DNAI1	Q9UI46	699 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	APPL1	Q9UKG1	709 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	MFHAS1	Q9Y4C4	1052 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169	LRRK2	Q5S007	2527 aa		11.5	□□□□□ -0.57
TCF4-238	ENST00000568169		A0A1W2PQC6	194 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	FAM72C	H0Y354	149 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	GOLGA8S	H3BPF8	625 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	TMCC1	O94876	653 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	CYP11B1	P15538	503 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	PNLIP	P16233	465 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	GLB1	P16278	677 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	CD82	P27701	267 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	HTR1B	P28222	390 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	ATP11A	P98196	1134 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	RAD51	Q06609	339 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	AGER	Q15109	404 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	TCEA2	Q15560	299 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	RAB6C	Q53S08	254 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	C2CD6	Q53TS8	623 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	FAM72A	Q5TYM5	149 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	KCTD16	Q68DU8	428 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	FAM72D	Q6L9T8	149 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	RWDD4	Q6NW29	188 aa	Known RBP	11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	DPY19L2P1	Q6NXN4	242 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	FAM72B	Q86X60	149 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	CREBRF	Q8IUR6	639 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169		Q8N9G6	341 aa	Predicted RBP	11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	ZSCAN1	Q8NBB4	408 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	HTR3C	Q8WXA8	447 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	CASKIN2	Q8WXE0	1202 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	USP7	Q93009	1102 aa		11.49	□□□□□ -0.57
TCF4-238	ENST00000568169	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.49	□□□□□ -0.57

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