RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 TTC7BQ86TV6 843 aa25.43■■□□□ 1.66
FANCA-228ENST00000567943 MAP7D3Q8IWC1 876 aa25.43■■□□□ 1.66
FANCA-228ENST00000567943 PCDH19Q8TAB3 1148 aa25.43■■□□□ 1.66
FANCA-228ENST00000567943 ZNF670Q9BS34 389 aa25.43■■□□□ 1.66
FANCA-228ENST00000567943 HS3ST3A1Q9Y663 406 aa25.43■■□□□ 1.66
FANCA-228ENST00000567943 TSPAN11A1L157 253 aa25.42■■□□□ 1.66
FANCA-228ENST00000567943 YKT6O15498 198 aa25.42■■□□□ 1.66
FANCA-228ENST00000567943 ITGAVP06756 1048 aa25.42■■□□□ 1.66
FANCA-228ENST00000567943 SPA17Q15506 151 aa25.42■■□□□ 1.66
FANCA-228ENST00000567943 ANKRD20A8PQ5CZ79 823 aa25.42■■□□□ 1.66
FANCA-228ENST00000567943 TMCO4Q5TGY1 634 aa25.42■■□□□ 1.66
FANCA-228ENST00000567943 ZSWIM9Q86XI8 627 aa25.42■■□□□ 1.66
FANCA-228ENST00000567943 OXR1Q8N573 874 aa25.42■■□□□ 1.66
FANCA-228ENST00000567943 ATPAF2Q8N5M1 289 aa25.42■■□□□ 1.66
FANCA-228ENST00000567943 APOBEC2Q9Y235 224 aaKnown RBP25.42■■□□□ 1.66
FANCA-228ENST00000567943 PCDHA13Q9Y5I0 950 aa25.42■■□□□ 1.66
FANCA-228ENST00000567943 SOWAHDA6NJG2 315 aa25.41■■□□□ 1.66
FANCA-228ENST00000567943 TNFSF14O43557 240 aa25.41■■□□□ 1.66
FANCA-228ENST00000567943 MAFKO60675 156 aa25.41■■□□□ 1.66
FANCA-228ENST00000567943 PEX11BO96011 259 aa25.41■■□□□ 1.66
FANCA-228ENST00000567943 NOP2P46087 812 aaKnown RBP25.41■■□□□ 1.66
FANCA-228ENST00000567943 SLC10A7Q0GE19 358 aa25.41■■□□□ 1.66
FANCA-228ENST00000567943 LBRQ14739 615 aaKnown RBP25.41■■□□□ 1.66
FANCA-228ENST00000567943 NCBP2-AS2Q69YL0 99 aa25.41■■□□□ 1.66
FANCA-228ENST00000567943 Q6ZSR6 202 aa25.41■■□□□ 1.66
FANCA-228ENST00000567943 SRLQ86TD4 932 aa25.41■■□□□ 1.66
FANCA-228ENST00000567943 TMTC1Q8IUR5 882 aa25.41■■□□□ 1.66
FANCA-228ENST00000567943 EID2Q8N6I1 236 aa25.41■■□□□ 1.66
FANCA-228ENST00000567943 RAPGEF5Q92565 580 aa25.41■■□□□ 1.66
FANCA-228ENST00000567943 ZNF599Q96NL3 588 aa25.41■■□□□ 1.66
FANCA-228ENST00000567943 LENG8Q96PV6 779 aaPredicted RBP25.41■■□□□ 1.66
FANCA-228ENST00000567943 SUV39H2Q9H5I1 410 aa25.41■■□□□ 1.66
FANCA-228ENST00000567943 SEPT3Q9UH03 358 aa25.41■■□□□ 1.66
FANCA-228ENST00000567943 TFR2Q9UP52 801 aa25.41■■□□□ 1.66
FANCA-228ENST00000567943 MSRB2Q9Y3D2 182 aa25.41■■□□□ 1.66
FANCA-228ENST00000567943 NEMP1O14524 444 aa25.4■■□□□ 1.66
FANCA-228ENST00000567943 MFSD11O43934 449 aa25.4■■□□□ 1.66
FANCA-228ENST00000567943 SDC3O75056 442 aa25.4■■□□□ 1.66
FANCA-228ENST00000567943 FECHP22830 423 aa25.4■■□□□ 1.66
FANCA-228ENST00000567943 KDELR1P24390 212 aa25.4■■□□□ 1.66
FANCA-228ENST00000567943 CSNK1DP48730 415 aa25.4■■□□□ 1.66
FANCA-228ENST00000567943 GRM3Q14832 879 aa25.4■■□□□ 1.66
FANCA-228ENST00000567943 TPRG1LQ5T0D9 272 aa25.4■■□□□ 1.66
FANCA-228ENST00000567943 UNQ6494/PRO21346Q6UXR6 183 aa25.4■■□□□ 1.66
FANCA-228ENST00000567943 CAMK1DQ8IU85 385 aa25.4■■□□□ 1.66
FANCA-228ENST00000567943 SLC25A45Q8N413 288 aa25.4■■□□□ 1.66
FANCA-228ENST00000567943 ASB12Q8WXK4 309 aa25.4■■□□□ 1.66
FANCA-228ENST00000567943 FAF2Q96CS3 445 aa25.4■■□□□ 1.66
FANCA-228ENST00000567943 PSKH2Q96QS6 385 aa25.4■■□□□ 1.66
FANCA-228ENST00000567943 ANP32EQ9BTT0 268 aa25.4■■□□□ 1.66
FANCA-228ENST00000567943 LUC7LQ9NQ29 371 aaKnown RBP25.4■■□□□ 1.66
FANCA-228ENST00000567943 HYOU1Q9Y4L1 999 aa25.4■■□□□ 1.66
FANCA-228ENST00000567943 EPN1Q9Y6I3 576 aaPredicted RBP25.4■■□□□ 1.66
FANCA-228ENST00000567943 LRRD1A4D1F6 860 aa25.39■■□□□ 1.66
FANCA-228ENST00000567943 GOLGA8CPA6NN73 597 aa25.39■■□□□ 1.66
FANCA-228ENST00000567943 A6NNZ2 444 aa25.39■■□□□ 1.66
FANCA-228ENST00000567943 MMP20O60882 483 aa25.39■■□□□ 1.66
FANCA-228ENST00000567943 NDUFA10O95299 355 aa25.39■■□□□ 1.66
FANCA-228ENST00000567943 TNNT1P13805 278 aa25.39■■□□□ 1.66
FANCA-228ENST00000567943 SLC1A1P43005 524 aa25.39■■□□□ 1.66
FANCA-228ENST00000567943 ZNF235Q14590 738 aa25.39■■□□□ 1.66
FANCA-228ENST00000567943 PAFAH1B3Q15102 231 aaKnown RBP25.39■■□□□ 1.66
FANCA-228ENST00000567943 KYAT3Q6YP21 454 aaKnown RBP25.39■■□□□ 1.66
FANCA-228ENST00000567943 ZSCAN30Q86W11 494 aa25.39■■□□□ 1.66
FANCA-228ENST00000567943 HCAR2Q8TDS4 363 aa25.39■■□□□ 1.66
FANCA-228ENST00000567943 CENPTQ96BT3 561 aa25.39■■□□□ 1.66
FANCA-228ENST00000567943 FTSJ1Q9UET6 329 aa25.39■■□□□ 1.66
FANCA-228ENST00000567943 PROS1P07225 676 aa25.38■■□□□ 1.65
FANCA-228ENST00000567943 COMTP21964 271 aa25.38■■□□□ 1.65
FANCA-228ENST00000567943 RENBPP51606 427 aa25.38■■□□□ 1.65
FANCA-228ENST00000567943 NSUN2Q08J23 767 aaKnown RBP eCLIP25.38■■□□□ 1.65
FANCA-228ENST00000567943 SGCGQ13326 291 aa25.38■■□□□ 1.65
FANCA-228ENST00000567943 UGP2Q16851 508 aa25.38■■□□□ 1.65
FANCA-228ENST00000567943 INAVAQ3KP66 663 aa25.38■■□□□ 1.65
FANCA-228ENST00000567943 CFAP58Q5T655 872 aa25.38■■□□□ 1.65
FANCA-228ENST00000567943 PTAR1Q7Z6K3 402 aaPredicted RBP25.38■■□□□ 1.65
FANCA-228ENST00000567943 PQLC3Q8N755 202 aa25.38■■□□□ 1.65
FANCA-228ENST00000567943 NSMCE1Q8WV22 266 aa25.38■■□□□ 1.65
FANCA-228ENST00000567943 ZNF641Q96N77 438 aaPredicted RBP25.38■■□□□ 1.65
FANCA-228ENST00000567943 TUBGCP5Q96RT8 1024 aa25.38■■□□□ 1.65
FANCA-228ENST00000567943 WRAP53Q9BUR4 548 aaKnown RBP25.38■■□□□ 1.65
FANCA-228ENST00000567943 ATP13A3Q9H7F0 1226 aa25.38■■□□□ 1.65
FANCA-228ENST00000567943 UCKL1Q9NWZ5 548 aa25.38■■□□□ 1.65
FANCA-228ENST00000567943 GOLGA4Q13439 2230 aaKnown RBP25.38■■□□□ 1.65
FANCA-228ENST00000567943 CFAP47Q6ZTR5 3102 aa25.38■■□□□ 1.65
FANCA-228ENST00000567943 ZFHX4Q86UP3 3567 aa25.38■■□□□ 1.65
FANCA-228ENST00000567943 LAMA5O15230 3695 aa25.38■■□□□ 1.65
FANCA-228ENST00000567943 SPOPO43791 374 aa25.37■■□□□ 1.65
FANCA-228ENST00000567943 MAP3K6O95382 1288 aa25.37■■□□□ 1.65
FANCA-228ENST00000567943 XPAP23025 273 aaPredicted RBP25.37■■□□□ 1.65
FANCA-228ENST00000567943 CDC25BP30305 580 aa25.37■■□□□ 1.65
FANCA-228ENST00000567943 SCNN1BP51168 640 aa25.37■■□□□ 1.65
FANCA-228ENST00000567943 HADHBP55084 474 aaKnown RBP25.37■■□□□ 1.65
FANCA-228ENST00000567943 DNAJC3Q13217 504 aa25.37■■□□□ 1.65
FANCA-228ENST00000567943 FZD2Q14332 565 aa25.37■■□□□ 1.65
FANCA-228ENST00000567943 TMEM52BQ4KMG9 183 aa25.37■■□□□ 1.65
FANCA-228ENST00000567943 LRRC38Q5VT99 294 aa25.37■■□□□ 1.65
FANCA-228ENST00000567943 RHOT1Q8IXI2 618 aa25.37■■□□□ 1.65
FANCA-228ENST00000567943 PGBD5Q8N414 524 aa25.37■■□□□ 1.65
FANCA-228ENST00000567943 SPC24Q8NBT2 197 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms