RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 PCDH20Q8N6Y1 951 aaKnown RBP13.94□□□□□ -0.18
SMG1-213ENST00000567737 TP53I13Q8NBR0 393 aaPredicted RBP13.94□□□□□ -0.18
SMG1-213ENST00000567737 TFAP2BQ92481 460 aa13.94□□□□□ -0.18
SMG1-213ENST00000567737 TEFMQ96QE5 360 aaKnown RBP13.94□□□□□ -0.18
SMG1-213ENST00000567737 CEP44Q9C0F1 390 aa13.94□□□□□ -0.18
SMG1-213ENST00000567737 DPEP2Q9H4A9 486 aa13.94□□□□□ -0.18
SMG1-213ENST00000567737 FAM204AQ9H8W3 233 aa13.94□□□□□ -0.18
SMG1-213ENST00000567737 POPDC2Q9HBU9 364 aa13.94□□□□□ -0.18
SMG1-213ENST00000567737 ST7Q9NRC1 585 aa13.94□□□□□ -0.18
SMG1-213ENST00000567737 PCDHB3Q9Y5E6 796 aa13.94□□□□□ -0.18
SMG1-213ENST00000567737 CSMD1Q96PZ7 3565 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 B4GAT1O43505 415 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 STX10O60499 249 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 RFPL1O75677 317 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 LDLRP01130 860 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 ALDH4A1P30038 563 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 MAN1A1P33908 653 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 NOP2P46087 812 aaKnown RBP13.93□□□□□ -0.18
SMG1-213ENST00000567737 LIMK2P53671 638 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 OR1D5P58170 312 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 ABHD18Q0P651 414 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 MTA1Q13330 715 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 IRF4Q15306 451 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 STILQ15468 1287 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 CNGA2Q16280 664 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 KLHL40Q2TBA0 621 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 ANKS6Q68DC2 871 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 RETSATQ6NUM9 610 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 RYBPQ8N488 228 aaPredicted RBP13.93□□□□□ -0.18
SMG1-213ENST00000567737 CXorf40AQ8TE69 158 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 PDCD6IPQ8WUM4 868 aaKnown RBP13.93□□□□□ -0.18
SMG1-213ENST00000567737 SLC29A3Q9BZD2 475 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 TRAF3IP3Q9Y228 551 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 ESPL1Q14674 2120 aa13.93□□□□□ -0.18
SMG1-213ENST00000567737 SYNJ2BP-COX16A0A087WUM0 186 aa13.92□□□□□ -0.18
SMG1-213ENST00000567737 RHPN2P1A8MT19 583 aa13.92□□□□□ -0.18
SMG1-213ENST00000567737 B4E171 279 aa13.92□□□□□ -0.18
SMG1-213ENST00000567737 MMP20O60882 483 aa13.92□□□□□ -0.18
SMG1-213ENST00000567737 ZNF821O75541 412 aaPredicted RBP13.92□□□□□ -0.18
SMG1-213ENST00000567737 ADCY5O95622 1261 aa13.92□□□□□ -0.18
SMG1-213ENST00000567737 PAEPP09466 180 aa13.92□□□□□ -0.18
SMG1-213ENST00000567737 GGCXP38435 758 aa13.92□□□□□ -0.18
SMG1-213ENST00000567737 TSPAN7P41732 249 aa13.92□□□□□ -0.18
SMG1-213ENST00000567737 SERPINH1P50454 418 aaKnown RBP13.92□□□□□ -0.18
SMG1-213ENST00000567737 PITX1P78337 314 aaPredicted RBP13.92□□□□□ -0.18
SMG1-213ENST00000567737 MRPL49Q13405 166 aaKnown RBP13.92□□□□□ -0.18
SMG1-213ENST00000567737 EIF4EBP2Q13542 120 aaPredicted RBP13.92□□□□□ -0.18
SMG1-213ENST00000567737 STK38Q15208 465 aa13.92□□□□□ -0.18
SMG1-213ENST00000567737 ZNF805Q5CZA5 627 aa13.92□□□□□ -0.18
SMG1-213ENST00000567737 SPECC1LQ69YQ0 1117 aa13.92□□□□□ -0.18
SMG1-213ENST00000567737 SETD3Q86TU7 594 aaPredicted RBP13.92□□□□□ -0.18
SMG1-213ENST00000567737 SFTPA2Q8IWL1 248 aa13.92□□□□□ -0.18
SMG1-213ENST00000567737 TRIT1Q9H3H1 467 aaKnown RBP13.92□□□□□ -0.18
SMG1-213ENST00000567737 ZSCAN16Q9H4T2 348 aaPredicted RBP13.92□□□□□ -0.18
SMG1-213ENST00000567737 CYP4F12Q9HCS2 524 aa13.92□□□□□ -0.18
SMG1-213ENST00000567737 OCIAD1Q9NX40 245 aa13.92□□□□□ -0.18
SMG1-213ENST00000567737 COX16Q9P0S2 106 aa13.92□□□□□ -0.18
SMG1-213ENST00000567737 HECAQ9UBI9 543 aaPredicted RBP13.92□□□□□ -0.18
SMG1-213ENST00000567737 ERRFI1Q9UJM3 462 aaPredicted RBP13.92□□□□□ -0.18
SMG1-213ENST00000567737 A0A0D9SEW6 157 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 TCP11X1B4DZS4 312 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 POLR2DO15514 142 aaKnown RBP13.91□□□□□ -0.18
SMG1-213ENST00000567737 HNRNPRO43390 633 aaKnown RBP13.91□□□□□ -0.18
SMG1-213ENST00000567737 RPL13P26373 211 aaKnown RBP13.91□□□□□ -0.18
SMG1-213ENST00000567737 ACADSBP45954 432 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 YWHAZP63104 245 aaKnown RBP13.91□□□□□ -0.18
SMG1-213ENST00000567737 CDK17Q00537 523 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 BIRC2Q13490 618 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 LRRC14Q15048 493 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 TMEM270Q6UE05 265 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 ANKK1Q8NFD2 765 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 OR4D9Q8NGE8 314 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 KIAA1524Q8TCG1 905 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 TCTN2Q96GX1 697 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 C5orf34Q96MH7 638 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 WDR92Q96MX6 357 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 APOOQ9BUR5 198 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 DDIT4Q9NX09 232 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 TLK1Q9UKI8 766 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 POLHQ9Y253 713 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 HS3ST4Q9Y661 456 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 DGKBQ9Y6T7 804 aa13.91□□□□□ -0.18
SMG1-213ENST00000567737 RP1L1Q8IWN7 2480 aaPredicted RBP13.91□□□□□ -0.18
SMG1-213ENST00000567737 AREL1O15033 823 aa13.9□□□□□ -0.18
SMG1-213ENST00000567737 KLRC4O43908 158 aa13.9□□□□□ -0.18
SMG1-213ENST00000567737 PDGFAP04085 211 aa13.9□□□□□ -0.18
SMG1-213ENST00000567737 THRAP10827 490 aa13.9□□□□□ -0.18
SMG1-213ENST00000567737 TBXAS1P24557 533 aaPredicted RBP13.9□□□□□ -0.18
SMG1-213ENST00000567737 BRD2P25440 801 aaKnown RBP13.9□□□□□ -0.18
SMG1-213ENST00000567737 CD1CP29017 333 aa13.9□□□□□ -0.18
SMG1-213ENST00000567737 SLC20A2Q08357 652 aa13.9□□□□□ -0.18
SMG1-213ENST00000567737 RABEP1Q15276 862 aa13.9□□□□□ -0.18
SMG1-213ENST00000567737 NFIL3Q16649 462 aa13.9□□□□□ -0.18
SMG1-213ENST00000567737 C5orf22Q49AR2 442 aa13.9□□□□□ -0.18
SMG1-213ENST00000567737 ALFQ53S48 1182 aa13.9□□□□□ -0.18
SMG1-213ENST00000567737 NYAP1Q6ZVC0 841 aa13.9□□□□□ -0.18
SMG1-213ENST00000567737 TTC7BQ86TV6 843 aa13.9□□□□□ -0.18
SMG1-213ENST00000567737 IRF2BP1Q8IU81 584 aa13.9□□□□□ -0.18
SMG1-213ENST00000567737 RTP4Q96DX8 246 aa13.9□□□□□ -0.18
SMG1-213ENST00000567737 PDXPQ96GD0 296 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms