RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 SEPT3Q9UH03 358 aa18.95■□□□□ 0.62
IFT140-208ENST00000566818 PLXNB3Q9ULL4 1909 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 SRRM3A6NNA2 597 aaPredicted RBP18.94■□□□□ 0.62
IFT140-208ENST00000566818 MYO1FO00160 1098 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 TRIM38O00635 465 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 TPM1P09493 284 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 ACP1P24666 158 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 IGFALSP35858 605 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 SSR1P43307 286 aaKnown RBP18.94■□□□□ 0.62
IFT140-208ENST00000566818 PFN3P60673 137 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 AP1S1P61966 158 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 YPEL5P62699 121 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 BCL2L1Q07817 233 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 KRT81Q14533 505 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 ZNF235Q14590 738 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 HADHQ16836 314 aaKnown RBP18.94■□□□□ 0.62
IFT140-208ENST00000566818 UGP2Q16851 508 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 POLNQ7Z5Q5 900 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 PROSER1Q86XN7 944 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 BBS5Q8N3I7 341 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 BTN2A2Q8WVV5 523 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 CSPG4P5Q96PW8 444 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 DUSP23Q9BVJ7 150 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 PCDH12Q9NPG4 1184 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 ATP8A1Q9Y2Q0 1164 aa18.94■□□□□ 0.62
IFT140-208ENST00000566818 FAM149AA5PLN7 773 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 SCAMP1O15126 338 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 RARAP10276 462 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 JUPP14923 745 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 HSPA9P38646 679 aaKnown RBP18.93■□□□□ 0.62
IFT140-208ENST00000566818 MMP12P39900 470 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 NSUN2Q08J23 767 aaKnown RBP eCLIP18.93■□□□□ 0.62
IFT140-208ENST00000566818 LBRQ14739 615 aaKnown RBP18.93■□□□□ 0.62
IFT140-208ENST00000566818 ZNF542PQ5EBM4 170 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 HES3Q5TGS1 186 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 SPECC1LQ69YQ0 1117 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 ARHGAP36Q6ZRI8 547 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 CAMK1DQ8IU85 385 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 ATPAF2Q8N5M1 289 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 PDCD7Q8N8D1 485 aaKnown RBP18.93■□□□□ 0.62
IFT140-208ENST00000566818 ZNF548Q8NEK5 533 aaPredicted RBP18.93■□□□□ 0.62
IFT140-208ENST00000566818 ZNF564Q8TBZ8 553 aaPredicted RBP18.93■□□□□ 0.62
IFT140-208ENST00000566818 NSMCE1Q8WV22 266 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 CENPTQ96BT3 561 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 BTBD6Q96KE9 485 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 DEF6Q9H4E7 631 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 USP29Q9HBJ7 922 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 PCDH18Q9HCL0 1135 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 ZNHIT6Q9NWK9 470 aaKnown RBP18.93■□□□□ 0.62
IFT140-208ENST00000566818 RCOR3Q9P2K3 495 aaPredicted RBP18.93■□□□□ 0.62
IFT140-208ENST00000566818 LCMT1Q9UIC8 334 aa18.93■□□□□ 0.62
IFT140-208ENST00000566818 SPEGQ15772 3267 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 RIOK3O14730 519 aaKnown RBP18.92■□□□□ 0.62
IFT140-208ENST00000566818 C6P13671 934 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 TCF4P15884 667 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 JUNDP17535 347 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 AMPD1P23109 780 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 HNRNPH3P31942 346 aaKnown RBP18.92■□□□□ 0.62
IFT140-208ENST00000566818 RGRP47804 291 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 DUSP3P51452 185 aaPredicted RBP18.92■□□□□ 0.62
IFT140-208ENST00000566818 SLC25A11Q02978 314 aaKnown RBP18.92■□□□□ 0.62
IFT140-208ENST00000566818 LRRC14Q15048 493 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 IRF4Q15306 451 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 TSR1Q2NL82 804 aaKnown RBP18.92■□□□□ 0.62
IFT140-208ENST00000566818 MACC1Q6ZN28 852 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 TP53I13Q8NBR0 393 aaPredicted RBP18.92■□□□□ 0.62
IFT140-208ENST00000566818 CTNNBL1Q8WYA6 563 aaPredicted RBP18.92■□□□□ 0.62
IFT140-208ENST00000566818 NXPE2Q96DL1 559 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 PSKH2Q96QS6 385 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 TSPY26PQ9H489 355 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 NCKIPSDQ9NZQ3 722 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 CTTNBP2NLQ9P2B4 639 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 UVRAGQ9P2Y5 699 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 DKK4Q9UBT3 224 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 CSNK1G3Q9Y6M4 447 aa18.92■□□□□ 0.62
IFT140-208ENST00000566818 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.91■□□□□ 0.62
IFT140-208ENST00000566818 AQP9O43315 295 aa18.91■□□□□ 0.62
IFT140-208ENST00000566818 BUB1BO60566 1050 aaPredicted RBP18.91■□□□□ 0.62
IFT140-208ENST00000566818 CKMT1AP12532 417 aa18.91■□□□□ 0.62
IFT140-208ENST00000566818 ITIH2P19823 946 aa18.91■□□□□ 0.62
IFT140-208ENST00000566818 EIF4A3P38919 411 aaKnown RBP18.91■□□□□ 0.62
IFT140-208ENST00000566818 SCNN1BP51168 640 aa18.91■□□□□ 0.62
IFT140-208ENST00000566818 CDH6P55285 790 aa18.91■□□□□ 0.62
IFT140-208ENST00000566818 POLR2LP62875 67 aaKnown RBP18.91■□□□□ 0.62
IFT140-208ENST00000566818 E2F1Q01094 437 aa18.91■□□□□ 0.62
IFT140-208ENST00000566818 MDM1Q8TC05 714 aa18.91■□□□□ 0.62
IFT140-208ENST00000566818 ETNK2Q9NVF9 386 aa18.91■□□□□ 0.62
IFT140-208ENST00000566818 SPASTQ9UBP0 616 aa18.91■□□□□ 0.62
IFT140-208ENST00000566818 APOBEC3BQ9UH17 382 aaKnown RBP18.91■□□□□ 0.62
IFT140-208ENST00000566818 A0A1W2PQ67 120 aa18.9■□□□□ 0.62
IFT140-208ENST00000566818 TRABD2BA6NFA1 517 aa18.9■□□□□ 0.62
IFT140-208ENST00000566818 TMEM110-MUSTN1A8MSY1 372 aa18.9■□□□□ 0.62
IFT140-208ENST00000566818 K7ESM1 405 aa18.9■□□□□ 0.62
IFT140-208ENST00000566818 LZTS3O60299 673 aaPredicted RBP18.9■□□□□ 0.62
IFT140-208ENST00000566818 CAPNS1P04632 268 aa18.9■□□□□ 0.62
IFT140-208ENST00000566818 H2AFZP0C0S5 128 aa18.9■□□□□ 0.62
IFT140-208ENST00000566818 NFKBIAP25963 317 aa18.9■□□□□ 0.62
IFT140-208ENST00000566818 LIG3P49916 1009 aa18.9■□□□□ 0.62
IFT140-208ENST00000566818 CAMK2BQ13554 666 aa18.9■□□□□ 0.62
IFT140-208ENST00000566818 SLC18A3Q16572 532 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms