RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 SPINT1O43278 529 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 MMP20O60882 483 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 TM7SF2O76062 418 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 MTA2O94776 668 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 TRIM16O95361 564 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 ITIH2P19823 946 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 HSPA9P38646 679 aaKnown RBP18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 MAGEA1P43355 309 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 AP1S1P61966 158 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 BNIP3Q12983 259 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 PAFAH1B3Q15102 231 aaKnown RBP18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 SHBQ15464 509 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 ODF2Q5BJF6 829 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 MARC1Q5VT66 337 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 ERAP2Q6P179 960 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 Q6ZSR6 202 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 PTAR1Q7Z6K3 402 aaPredicted RBP18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 ABI3BPQ7Z7G0 1075 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 CCDC170Q8IYT3 715 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 OR13H1Q8NG92 308 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 PCDH19Q8TAB3 1148 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 SAP25Q8TEE9 199 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 BMFQ96LC9 184 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 C1QTNF7Q9BXJ2 289 aa18.52■□□□□ 0.56
SYNGR3-204ENST00000564642 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 TSPAN11A1L157 253 aa18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 POM121BA6NF01 834 aa18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 MUSKO15146 869 aa18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 RAD51BO15315 384 aa18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 FTH1P19P0C7X4 201 aa18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 KDELR1P24390 212 aa18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 EPHA8P29322 1005 aaPredicted RBP18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 CYLC1P35663 651 aaPredicted RBP18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 NOP2P46087 812 aaKnown RBP18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 POLR2LP62875 67 aaKnown RBP18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 SPA17Q15506 151 aa18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 TMEM52BQ4KMG9 183 aa18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 NCBP2-AS2Q69YL0 99 aa18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 KYAT3Q6YP21 454 aaKnown RBP18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 GAS2L3Q86XJ1 694 aa18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 BAHD1Q8TBE0 780 aaPredicted RBP18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 WRAP53Q9BUR4 548 aaKnown RBP18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 PCDH12Q9NPG4 1184 aa18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 SCUBE2Q9NQ36 999 aa18.51■□□□□ 0.55
SYNGR3-204ENST00000564642 TDRD6O60522 2096 aaKnown RBP18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 GOLGA8CPA6NN73 597 aa18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 RIOK3O14730 519 aaKnown RBP18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 TNFSF14O43557 240 aa18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 MFSD11O43934 449 aa18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 PEX11BO96011 259 aa18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 HOXB3P14651 431 aaPredicted RBP18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 GARSP41250 739 aaKnown RBP18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 SLC1A1P43005 524 aa18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 MMP13P45452 471 aa18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 RABIFP47224 123 aa18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 TCEAL1Q15170 157 aa18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 TIGD7Q6NT04 549 aaPredicted RBP18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 DENND6BQ8NEG7 585 aa18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 RAPGEF5Q92565 580 aa18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 PANX2Q96RD6 677 aa18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 NUDCD1Q96RS6 583 aa18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 KLF6Q99612 283 aaPredicted RBP18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 MAK16Q9BXY0 300 aaKnown RBP18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 LUC7LQ9NQ29 371 aaKnown RBP18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 FTSJ1Q9UET6 329 aa18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 ATP8A1Q9Y2Q0 1164 aa18.5■□□□□ 0.55
SYNGR3-204ENST00000564642 TTC24A2A3L6 582 aaPredicted RBP18.49■□□□□ 0.55
SYNGR3-204ENST00000564642 LRRD1A4D1F6 860 aa18.49■□□□□ 0.55
SYNGR3-204ENST00000564642 TOP3BO95985 862 aaKnown RBP18.49■□□□□ 0.55
SYNGR3-204ENST00000564642 TNNT1P13805 278 aa18.49■□□□□ 0.55
SYNGR3-204ENST00000564642 ITKQ08881 620 aa18.49■□□□□ 0.55
SYNGR3-204ENST00000564642 GALNT2Q10471 571 aa18.49■□□□□ 0.55
SYNGR3-204ENST00000564642 IFI16Q16666 785 aaKnown RBP18.49■□□□□ 0.55
SYNGR3-204ENST00000564642 PGBD5Q8N414 524 aa18.49■□□□□ 0.55
SYNGR3-204ENST00000564642 EID2Q8N6I1 236 aa18.49■□□□□ 0.55
SYNGR3-204ENST00000564642 CENPTQ96BT3 561 aa18.49■□□□□ 0.55
SYNGR3-204ENST00000564642 FAF2Q96CS3 445 aa18.49■□□□□ 0.55
SYNGR3-204ENST00000564642 RNF157Q96PX1 679 aa18.49■□□□□ 0.55
SYNGR3-204ENST00000564642 MGME1Q9BQP7 344 aa18.49■□□□□ 0.55
SYNGR3-204ENST00000564642 SCNM1Q9BWG6 230 aa18.49■□□□□ 0.55
SYNGR3-204ENST00000564642 PCDHA13Q9Y5I0 950 aa18.49■□□□□ 0.55
SYNGR3-204ENST00000564642 LRRK1Q38SD2 2015 aa18.49■□□□□ 0.55
SYNGR3-204ENST00000564642 A0A1W2PQ67 120 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 SPOPO43791 374 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 HYAL3O43820 417 aaPredicted RBP18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 SDC3O75056 442 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 NEBLO76041 1014 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 MAP3K6O95382 1288 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 LCA5LO95447 670 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 LDOC1O95751 146 aaPredicted RBP18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 ATXN1LP0C7T5 689 aaKnown RBP18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 SPINK2P20155 84 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 MX2P20592 715 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 CCNCP24863 283 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 MAXP61244 160 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 RALGPS1Q5JS13 557 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 LRRC38Q5VT99 294 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 SLCO6A1Q86UG4 719 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 ZSWIM9Q86XI8 627 aa18.48■□□□□ 0.55
SYNGR3-204ENST00000564642 TMTC1Q8IUR5 882 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms