RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 DNAJB3Q8WWF6 145 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 MFSD3Q96ES6 412 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 PRR11Q96HE9 360 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-249ENST00000564606 CLPTM1LQ96KA5 538 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 CEP295NLQ96MC4 621 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 ZNF778Q96MU6 729 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 FCRL3Q96P31 734 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-249ENST00000564606 TUBGCP5Q96RT8 1024 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 TCF12Q99081 682 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 MCMBPQ9BTE3 642 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 C9orf16Q9BUW7 83 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 FICDQ9BVA6 458 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 NUSAP1Q9BXS6 441 aaKnown RBP7.69□□□□□ -1.18
ATXN3-249ENST00000564606 KATNBL1Q9H079 304 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.69□□□□□ -1.18
ATXN3-249ENST00000564606 MFSD1Q9H3U5 465 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 EBF3Q9H4W6 596 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 POMKQ9H5K3 350 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 CD320Q9NPF0 282 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 CHRAC1Q9NRG0 131 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 FAM105AQ9NUU6 356 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 RIC8BQ9NVN3 520 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 RBM22Q9NW64 420 aaKnown RBP eCLIP7.69□□□□□ -1.18
ATXN3-249ENST00000564606 SARDHQ9UL12 918 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 SLC8A2Q9UPR5 921 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 AP4B1Q9Y6B7 739 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 COMMD10Q9Y6G5 202 aa7.69□□□□□ -1.18
ATXN3-249ENST00000564606 A0A087WXM4 84 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-249ENST00000564606 YJEFN3A6XGL0 299 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 PPEF2O14830 753 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 ANGPT2O15123 496 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 IRAK2O43187 625 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 NRP2O60462 931 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 SNAP91O60641 907 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 CRCPO75575 148 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 SOAT2O75908 522 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 DDNO94850 711 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-249ENST00000564606 CRTAMO95727 393 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 MLYCDO95822 493 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 GLP2RO95838 553 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 AHSGP02765 367 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 CAPNS1P04632 268 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 GPIP06744 558 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 C8BP07358 591 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 FGF4P08620 206 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 USP17L7P0C7H9 530 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 SLC35E2BP0CK96 405 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 AKR1A1P14550 325 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 IDO1P14902 403 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 TFE3P19532 575 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-249ENST00000564606 SAT1P21673 171 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 PSMA4P25789 261 aaKnown RBP7.68□□□□□ -1.18
ATXN3-249ENST00000564606 PEX2P28328 305 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 EPHA3P29320 983 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 PMLP29590 882 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 EPHX2P34913 555 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 ETFBP38117 255 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 MAPKAPK2P49137 400 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 ATXN1P54253 815 aaKnown RBP7.68□□□□□ -1.18
ATXN3-249ENST00000564606 AQP4P55087 323 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 ADAM17P78536 824 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 LSAMPQ13449 338 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 TUSC3Q13454 348 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 SEPT6Q14141 434 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 CNPY1Q3B7I2 92 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 USP41Q3LFD5 358 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 PARP15Q460N3 678 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 RAB6CQ53S08 254 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 MTX3Q5HYI7 312 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 AARS2Q5JTZ9 985 aaKnown RBP7.68□□□□□ -1.18
ATXN3-249ENST00000564606 TCHHL1Q5QJ38 904 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-249ENST00000564606 UBXN11Q5T124 520 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 TSTD2Q5T7W7 516 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 SYPL2Q5VXT5 272 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 ZNF470Q6ECI4 717 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 FAM171BQ6P995 826 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 ARHGAP22Q7Z5H3 698 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 MRPL10Q7Z7H8 261 aaKnown RBP7.68□□□□□ -1.18
ATXN3-249ENST00000564606 RETREG3Q86VR2 466 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 OSTM1Q86WC4 334 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 DHFR2Q86XF0 187 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 GALNT13Q8IUC8 556 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 FAM9CQ8IZT9 166 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 UMODL1-AS1Q8N2C9 162 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 NKAPQ8N5F7 415 aaKnown RBP7.68□□□□□ -1.18
ATXN3-249ENST00000564606 SLC25A41Q8N5S1 370 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 FAM160A2Q8N612 972 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-249ENST00000564606 C2orf69Q8N8R5 385 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 IPMKQ8NFU5 416 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 DQX1Q8TE96 717 aaKnown RBP7.68□□□□□ -1.18
ATXN3-249ENST00000564606 KCTD4Q8WVF5 259 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 USP13Q92995 863 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-249ENST00000564606 PPWD1Q96BP3 646 aaKnown RBP7.68□□□□□ -1.18
ATXN3-249ENST00000564606 RCN3Q96D15 328 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 ZBTB10Q96DT7 871 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 L3HYPDHQ96EM0 354 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 NRBF2Q96F24 287 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 ATXN7L3BQ96GX2 97 aa7.68□□□□□ -1.18
ATXN3-249ENST00000564606 PCED1BQ96HM7 432 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms