RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 SGO1Q5FBB7 561 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 ISM2Q6H9L7 571 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 LRIG3Q6UXM1 1119 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 IGFN1Q86VF2 1251 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 CCDC25Q86WR0 208 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 KIAA2013Q8IYS2 634 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 HACE1Q8IYU2 909 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 RNF168Q8IYW5 571 aaPredicted RBP2.68□□□□□ -1.98
CHD9-209ENST00000564255 SYT2Q8N9I0 419 aaPredicted RBP2.68□□□□□ -1.98
CHD9-209ENST00000564255 POMGNT2Q8NAT1 580 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 LRRC59Q96AG4 307 aaKnown RBP2.68□□□□□ -1.98
CHD9-209ENST00000564255 PGAP3Q96FM1 320 aaPredicted RBP2.68□□□□□ -1.98
CHD9-209ENST00000564255 PPP1R13BQ96KQ4 1090 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 GCNAQ96QF7 691 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 ZNF747Q9BV97 191 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 RANGRFQ9HD47 186 aaPredicted RBP2.68□□□□□ -1.98
CHD9-209ENST00000564255 SPAG4Q9NPE6 437 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 OGFRQ9NZT2 677 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 NENFQ9UMX5 172 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 AAR2Q9Y312 384 aaKnown RBP2.68□□□□□ -1.98
CHD9-209ENST00000564255 KLK8O60259 260 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 SLC25A12O75746 678 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 TOP3BO95985 862 aaKnown RBP2.68□□□□□ -1.98
CHD9-209ENST00000564255 QDPRP09417 244 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 ZNF182P17025 639 aaPredicted RBP2.68□□□□□ -1.98
CHD9-209ENST00000564255 TMEM11P17152 192 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 SRD5A1P18405 259 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 ZNF41P51814 821 aaPredicted RBP2.68□□□□□ -1.98
CHD9-209ENST00000564255 MRPL12P52815 198 aaKnown RBP2.68□□□□□ -1.98
CHD9-209ENST00000564255 RRP1P56182 461 aaKnown RBP2.68□□□□□ -1.98
CHD9-209ENST00000564255 GRIK3Q13003 919 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 SCARB2Q14108 478 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 TMEM266Q2M3C6 531 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 IGFL4Q6B9Z1 124 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 CRELD2Q6UXH1 353 aaPredicted RBP2.68□□□□□ -1.98
CHD9-209ENST00000564255 SEPT14Q6ZU15 432 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 CYB5R4Q7L1T6 521 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 ZNF627Q7L945 461 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 SPRED1Q7Z699 444 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 TSPAN33Q86UF1 283 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 KBTBD6Q86V97 674 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 TDRD5Q8NAT2 981 aaKnown RBP2.68□□□□□ -1.98
CHD9-209ENST00000564255 TMEM68Q96MH6 324 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 SLITRK1Q96PX8 696 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 BBS4Q96RK4 519 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 PRRX2Q99811 253 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 ADPGKQ9BRR6 497 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 EDEM3Q9BZQ6 932 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 SLC35C2Q9NQQ7 365 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 SEMA4GQ9NTN9 838 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 ARPP21Q9UBL0 812 aaPredicted RBP2.68□□□□□ -1.98
CHD9-209ENST00000564255 SEL1LQ9UBV2 794 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 LSM4Q9Y4Z0 139 aaKnown RBP2.68□□□□□ -1.98
CHD9-209ENST00000564255 WNT6Q9Y6F9 365 aa2.68□□□□□ -1.98
CHD9-209ENST00000564255 COL11A2P13942 1736 aaPredicted RBP2.67□□□□□ -1.98
CHD9-209ENST00000564255 A0A096LPK6 155 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 C17orf102A2RUQ5 167 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 TMEM191CA6NGB0 347 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 HS6ST1O60243 411 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 MITFO75030 526 aaPredicted RBP2.67□□□□□ -1.98
CHD9-209ENST00000564255 NFATC1O95644 943 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 HSPA4LO95757 839 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 PCNAP12004 261 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 KRT10P13645 584 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 TRIM21P19474 475 aaKnown RBP2.67□□□□□ -1.98
CHD9-209ENST00000564255 AGAP20933 346 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 EEF1DP29692 281 aaKnown RBP2.67□□□□□ -1.98
CHD9-209ENST00000564255 CLCN3P51790 818 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 PNLIPRP2P54317 469 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 SLC12A2P55011 1212 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 YPEL5P62699 121 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 USP41Q3LFD5 358 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 PLEKHO1Q53GL0 409 aaPredicted RBP2.67□□□□□ -1.98
CHD9-209ENST00000564255 FBLN7Q53RD9 439 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 TCP11X2Q5H9J9 407 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 TTC39AQ5SRH9 613 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 C6orf141Q5SZD1 244 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 MEX3CQ5U5Q3 659 aaKnown RBP2.67□□□□□ -1.98
CHD9-209ENST00000564255 CLEC17AQ6ZS10 378 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 TBC1D26Q86UD7 250 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 TDRPQ86YL5 185 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 TEX11Q8IYF3 940 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 C8orf58Q8NAV2 365 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 TMCO6Q96DC7 493 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 ABHD1Q96SE0 405 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 SIN3AQ96ST3 1273 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 DUSP26Q9BV47 211 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 C1QTNF5Q9BXJ0 243 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 NUF2Q9BZD4 464 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 ERVMER34-1Q9H9K5 563 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 IL17RBQ9NRM6 502 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 RNF146Q9NTX7 359 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 SLC8A2Q9UPR5 921 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 EXO1Q9UQ84 846 aaKnown RBP2.67□□□□□ -1.98
CHD9-209ENST00000564255 A3GALT2U3KPV4 340 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 A0A1W2PR77 199 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 HSPB2A8KAH6 182 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 A8MV72 311 aaPredicted RBP2.67□□□□□ -1.98
CHD9-209ENST00000564255 FOXN1O15353 648 aa2.67□□□□□ -1.98
CHD9-209ENST00000564255 DAB1O75553 588 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms