RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 PEX11BO96011 259 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 HSPA9P38646 679 aaKnown RBP16.75■□□□□ 0.27
CDT1-202ENST00000562747 GARSP41250 739 aaKnown RBP16.75■□□□□ 0.27
CDT1-202ENST00000562747 GRIA4P48058 902 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 PPP2CBP62714 309 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 RACK1P63244 317 aaKnown RBP16.75■□□□□ 0.27
CDT1-202ENST00000562747 PPP2CAP67775 309 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 GALNT2Q10471 571 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 TEAD4Q15561 434 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 ODF2Q5BJF6 829 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 ZSCAN30Q86W11 494 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 BBS5Q8N3I7 341 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 PQLC3Q8N755 202 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 TSEN2Q8NCE0 465 aaKnown RBP16.75■□□□□ 0.27
CDT1-202ENST00000562747 ACRBPQ8NEB7 543 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 TPCN2Q8NHX9 752 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 HCAR2Q8TDS4 363 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 NSMCE1Q8WV22 266 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 KLHL32Q96NJ5 620 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 TUBGCP5Q96RT8 1024 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 EBF2Q9HAK2 575 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 DKK3Q9UBP4 350 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 SALL4Q9UJQ4 1053 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 DMTF1Q9Y222 760 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 ANKRD6Q9Y2G4 727 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 HYOU1Q9Y4L1 999 aa16.75■□□□□ 0.27
CDT1-202ENST00000562747 INSIG1O15503 277 aa16.74■□□□□ 0.27
CDT1-202ENST00000562747 RNGTTO60942 597 aaKnown RBP16.74■□□□□ 0.27
CDT1-202ENST00000562747 KRT1P04264 644 aa16.74■□□□□ 0.27
CDT1-202ENST00000562747 IL9RQ01113 521 aa16.74■□□□□ 0.27
CDT1-202ENST00000562747 SLC10A7Q0GE19 358 aa16.74■□□□□ 0.27
CDT1-202ENST00000562747 CAMK2BQ13554 666 aa16.74■□□□□ 0.27
CDT1-202ENST00000562747 ZNF235Q14590 738 aa16.74■□□□□ 0.27
CDT1-202ENST00000562747 SETMARQ53H47 684 aaPredicted RBP16.74■□□□□ 0.27
CDT1-202ENST00000562747 TIGD7Q6NT04 549 aaPredicted RBP16.74■□□□□ 0.27
CDT1-202ENST00000562747 DAAM2Q86T65 1068 aa16.74■□□□□ 0.27
CDT1-202ENST00000562747 KIAA1328Q86T90 577 aa16.74■□□□□ 0.27
CDT1-202ENST00000562747 SRLQ86TD4 932 aa16.74■□□□□ 0.27
CDT1-202ENST00000562747 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.74■□□□□ 0.27
CDT1-202ENST00000562747 CRELD1Q96HD1 420 aa16.74■□□□□ 0.27
CDT1-202ENST00000562747 ZNF641Q96N77 438 aaPredicted RBP16.74■□□□□ 0.27
CDT1-202ENST00000562747 CDC6Q99741 560 aa16.74■□□□□ 0.27
CDT1-202ENST00000562747 MAK16Q9BXY0 300 aaKnown RBP16.74■□□□□ 0.27
CDT1-202ENST00000562747 DKK4Q9UBT3 224 aa16.74■□□□□ 0.27
CDT1-202ENST00000562747 FADS3Q9Y5Q0 445 aa16.74■□□□□ 0.27
CDT1-202ENST00000562747 KNL1Q8NG31 2342 aa16.74■□□□□ 0.27
CDT1-202ENST00000562747 H0Y8X5 98 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 PCDH8O95206 1070 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 TNNT1P13805 278 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 ZFXP17010 805 aaPredicted RBP16.73■□□□□ 0.27
CDT1-202ENST00000562747 MX2P20592 715 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 RGRP47804 291 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 SUOXP51687 545 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 NAP1L1P55209 391 aaKnown RBP16.73■□□□□ 0.27
CDT1-202ENST00000562747 AP1S1P61966 158 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 IFI16Q16666 785 aaKnown RBP16.73■□□□□ 0.27
CDT1-202ENST00000562747 MARC1Q5VT66 337 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 SLC9A4Q6AI14 798 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 NAPEPLDQ6IQ20 393 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 KIAA1161Q6NSJ0 714 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 HORMAD1Q86X24 394 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 PLD5Q8N7P1 536 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 FATE1Q969F0 183 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 SKA1Q96BD8 255 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 FEM1CQ96JP0 617 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 SLC6A18Q96N87 628 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 TSGA13Q96PP4 275 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 LACRTQ9GZZ8 138 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 GOLPH3Q9H4A6 298 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 SUV39H2Q9H5I1 410 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 ATP13A3Q9H7F0 1226 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.73■□□□□ 0.27
CDT1-202ENST00000562747 DUSP10Q9Y6W6 482 aa16.73■□□□□ 0.27
CDT1-202ENST00000562747 COL5A1P20908 1838 aaPredicted RBP16.73■□□□□ 0.27
CDT1-202ENST00000562747 CABIN1Q9Y6J0 2220 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 A0A1W2PQU0 124 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 TSPAN11A1L157 253 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 TRABD2BA6NFA1 517 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 APOL1O14791 398 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 MUSKO15146 869 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 TSPAN6O43657 245 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 PIGNO95427 931 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 CCNCP24863 283 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 SERPINA4P29622 427 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 MAT2AP31153 395 aaKnown RBP16.72■□□□□ 0.27
CDT1-202ENST00000562747 ABL2P42684 1182 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 CTSKP43235 329 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 MMP13P45452 471 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 RPS21P63220 83 aaKnown RBP16.72■□□□□ 0.27
CDT1-202ENST00000562747 GBE1Q04446 702 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 CYP4F3Q08477 520 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 RALGPS1Q5JS13 557 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 BRAT1Q6PJG6 821 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 ADAT2Q7Z6V5 191 aaKnown RBP16.72■□□□□ 0.27
CDT1-202ENST00000562747 TTC7BQ86TV6 843 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 KATNAL2Q8IYT4 538 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 TEX26Q8N6G2 289 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 CCDC112Q8NEF3 446 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 RNF25Q96BH1 459 aaPredicted RBP16.72■□□□□ 0.27
CDT1-202ENST00000562747 HDAC11Q96DB2 347 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms