RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 ITKQ08881 620 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 FZD2Q14332 565 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 ZNF235Q14590 738 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 IRF4Q15306 451 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 LLGL1Q15334 1064 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 SLC18A3Q16572 532 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 HADHQ16836 314 aaKnown RBP9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 TSR1Q2NL82 804 aaKnown RBP9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 B4GALNT4Q76KP1 1039 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 KANSL1Q7Z3B3 1105 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 RD3Q7Z3Z2 195 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 ABI3BPQ7Z7G0 1075 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 GLRX5Q86SX6 157 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 IQCHQ86VS3 1027 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 SLC25A45Q8N413 288 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 PGBD5Q8N414 524 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 ATPAF2Q8N5M1 289 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 KCTD6Q8NC69 237 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 MDM1Q8TC05 714 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 LMX1AQ8TE12 382 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 CTNNBL1Q8WYA6 563 aaPredicted RBP9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 ZCCHC14Q8WYQ9 949 aaKnown RBP9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 RAB7BQ96AH8 199 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 IQCDQ96DY2 449 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 DNAJC7Q99615 494 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 C1QTNF2Q9BXJ5 285 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 TRIM5Q9C035 493 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 SUDS3Q9H7L9 328 aaPredicted RBP9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 ERVMER34-1Q9H9K5 563 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 NHEJ1Q9H9Q4 299 aaPredicted RBP9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 ABHD10Q9NUJ1 306 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 KLF15Q9UIH9 416 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 ZMIZ1Q9ULJ6 1067 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 PNMA8BQ9ULN7 279 aaPredicted RBP9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 TPX2Q9ULW0 747 aaKnown RBP9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 MSRB2Q9Y3D2 182 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 TTLL3Q9Y4R7 772 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 PCDHGC4Q9Y5F7 938 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 LRRK1Q38SD2 2015 aa9.56□□□□□ -0.88
NSMCE1-203ENST00000562039 PTPRBP23467 1997 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 RIOK3O14730 519 aaKnown RBP9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 PIAS2O75928 621 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 CELA2BP08218 269 aaPredicted RBP9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 TPM1P09493 284 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 C6P13671 934 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 JUNDP17535 347 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 CTPS1P17812 591 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 IL4RP24394 825 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 HNRNPH3P31942 346 aaKnown RBP9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 HCAR3P49019 387 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 LIG3P49916 1009 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 THOP1P52888 689 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 BCL2L1Q07817 233 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 EIF2B5Q13144 721 aaKnown RBP9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 TRIM14Q14142 442 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 DPYSL3Q14195 570 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 ACAP1Q15027 740 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 UGP2Q16851 508 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 ASTE1Q2TB18 679 aaPredicted RBP9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 DEFB133Q30KQ1 61 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 TMCO4Q5TGY1 634 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 CRTC1Q6UUV9 634 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 KYAT3Q6YP21 454 aaKnown RBP9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 PSTKQ8IV42 348 aaKnown RBP9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 OXR1Q8N573 874 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 NIPA2Q8N8Q9 360 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 TP53I13Q8NBR0 393 aaPredicted RBP9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 PCDH19Q8TAB3 1148 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 SLC35G2Q8TBE7 412 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 RAPGEF5Q92565 580 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 TSC1Q92574 1164 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 TSACCQ96A04 125 aaPredicted RBP9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 CCDC42Q96M95 316 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 CPEB1Q9BZB8 566 aaKnown RBP9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 RBSNQ9H1K0 784 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 ATP13A3Q9H7F0 1226 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 NT5MQ9NPB1 228 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 SCUBE2Q9NQ36 999 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 DONSONQ9NYP3 566 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 SEPT3Q9UH03 358 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 ATP8A1Q9Y2Q0 1164 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 OR1A2Q9Y585 309 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 HS3ST3A1Q9Y663 406 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 KNTC1P50748 2209 aa9.55□□□□□ -0.88
NSMCE1-203ENST00000562039 USP24Q9UPU5 2620 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 CXorf51AA0A1B0GTR3 108 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 EIF3CLB5ME19 914 aaKnown RBP9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 AKR1B15C9JRZ8 316 aaPredicted RBP9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 CASC3O15234 703 aaKnown RBP9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 YKT6O15498 198 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 MAFKO60675 156 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 RFPL3O75679 317 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 PEX11BO96011 259 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 TMEM253P0C7T8 217 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 GIMD1P0DJR0 217 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 SERPINA4P29622 427 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 RABIFP47224 123 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 ACADVLP49748 655 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 ARSEP51690 589 aa9.54□□□□□ -0.88
NSMCE1-203ENST00000562039 GBE1Q04446 702 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms