RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 GJB7Q6PEY0 223 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 RRAGAQ7L523 313 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 RASGRP2Q7LDG7 609 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 SHFQ7M4L6 423 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 CCDC117Q8IWD4 279 aaPredicted RBP3.28□□□□□ -1.88
USP8-216ENST00000561206 FAM186BQ8IYM0 893 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 SPATA22Q8NHS9 363 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 NCSTNQ92542 709 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 TANKQ92844 425 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 YME1L1Q96TA2 773 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 CSF3RQ99062 836 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 PLEKHA2Q9HB19 425 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 PTPRHQ9HD43 1115 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 NOX4Q9NPH5 578 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 SPATS2LQ9NUQ6 558 aaKnown RBP3.28□□□□□ -1.88
USP8-216ENST00000561206 SNX9Q9Y5X1 595 aa3.28□□□□□ -1.88
USP8-216ENST00000561206 CGNL1Q0VF96 1302 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 A0A087WV62 115 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 ZNF587BE7ETH6 402 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 ACKR2O00590 384 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 SEPT4O43236 478 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 HSPA12AO43301 675 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 ATP1A1P05023 1023 aaKnown RBP3.27□□□□□ -1.89
USP8-216ENST00000561206 CLCN3P51790 818 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 ARSFP54793 590 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 SMAD1Q15797 465 aaKnown RBP3.27□□□□□ -1.89
USP8-216ENST00000561206 SYT16Q17RD7 645 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 ATP13A5Q4VNC0 1218 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 FAM122CQ6P4D5 195 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 EPHX4Q8IUS5 362 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 TMEM170AQ8WVE7 144 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 C3orf30Q96M34 536 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 TRAPPC9Q96Q05 1148 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 TRMT61BQ9BVS5 477 aaKnown RBP3.27□□□□□ -1.89
USP8-216ENST00000561206 LRRC4Q9HBW1 653 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 GEMIN8Q9NWZ8 242 aaKnown RBP3.27□□□□□ -1.89
USP8-216ENST00000561206 SLC9A2Q9UBY0 812 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 ZNF711Q9Y462 761 aa3.27□□□□□ -1.89
USP8-216ENST00000561206 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.26□□□□□ -1.89
USP8-216ENST00000561206 H0Y3Z8 333 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 SLC25A17O43808 307 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 CAND2O75155 1236 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 TIPRLO75663 272 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 RFPL2O75678 378 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 ADAP00813 363 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 MCM2P49736 904 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 AMZ1Q400G9 498 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 HSP90AB2PQ58FF8 381 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 SULT6B1Q6IMI4 303 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 XRRA1Q6P2D8 792 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 PGBD2Q6P3X8 592 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 SYT13Q7L8C5 426 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 SLC26A9Q7LBE3 791 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 SATL1Q86VE3 508 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 ZC3HC1Q86WB0 502 aaKnown RBP3.26□□□□□ -1.89
USP8-216ENST00000561206 SPAG16Q8N0X2 631 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 KTI12Q96EK9 354 aaPredicted RBP3.26□□□□□ -1.89
USP8-216ENST00000561206 CCDC136Q96JN2 1154 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 PYGO2Q9BRQ0 406 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 RBM4Q9BWF3 364 aaKnown RBP3.26□□□□□ -1.89
USP8-216ENST00000561206 FBRSL1Q9HCM7 1045 aaKnown RBP3.26□□□□□ -1.89
USP8-216ENST00000561206 G6PC2Q9NQR9 355 aa3.26□□□□□ -1.89
USP8-216ENST00000561206 IFT80Q9P2H3 777 aaPredicted RBP3.26□□□□□ -1.89
USP8-216ENST00000561206 IGKV3D-15A0A087WSY6 115 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 A0A0G2JPF8 293 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 HNRNPCL3B7ZW38 293 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 C16orf97H3BN30 126 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 EBAG9O00559 213 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 MID1O15344 667 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 HNRNPCL1O60812 293 aaKnown RBP3.25□□□□□ -1.89
USP8-216ENST00000561206 KRT18P05783 430 aaKnown RBP3.25□□□□□ -1.89
USP8-216ENST00000561206 HNRNPCL4P0DMR1 293 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 TFPIP10646 304 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 EFNB3Q15768 340 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 TANGO2Q6ICL3 276 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 LYG1Q8N1E2 194 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 GHDCQ8N2G8 530 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 ATG16L2Q8NAA4 619 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 KCNH5Q8NCM2 988 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 CREB3L4Q8TEY5 395 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 OTULINQ96BN8 352 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 ZNF501Q96CX3 271 aaPredicted RBP3.25□□□□□ -1.89
USP8-216ENST00000561206 TMEM19Q96HH6 336 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 TTC14Q96N46 770 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 CTDSP1Q9GZU7 261 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 ARNT2Q9HBZ2 717 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 NLRC4Q9NPP4 1024 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 CYSLTR2Q9NS75 346 aa3.25□□□□□ -1.89
USP8-216ENST00000561206 A0A1W2PS18 150 aa3.24□□□□□ -1.89
USP8-216ENST00000561206 E7EVH7 732 aa3.24□□□□□ -1.89
USP8-216ENST00000561206 PRC1O43663 620 aa3.24□□□□□ -1.89
USP8-216ENST00000561206 ZNF500O60304 480 aaPredicted RBP3.24□□□□□ -1.89
USP8-216ENST00000561206 ZIC3O60481 467 aa3.24□□□□□ -1.89
USP8-216ENST00000561206 NDUFS7O75251 213 aa3.24□□□□□ -1.89
USP8-216ENST00000561206 PIGAP37287 484 aa3.24□□□□□ -1.89
USP8-216ENST00000561206 NR0B1P51843 470 aaKnown RBP3.24□□□□□ -1.89
USP8-216ENST00000561206 PMP22Q01453 160 aa3.24□□□□□ -1.89
USP8-216ENST00000561206 PPP6R3Q5H9R7 873 aaPredicted RBP3.24□□□□□ -1.89
USP8-216ENST00000561206 ZNF484Q5JVG2 852 aa3.24□□□□□ -1.89
USP8-216ENST00000561206 SH2D4BQ5SQS7 431 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms