RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 CEP44Q9C0F1 390 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 TWSG1Q9GZX9 223 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 CUEDC2Q9H467 287 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 FAM204AQ9H8W3 233 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 MRPL40Q9NQ50 206 aaKnown RBP9.65□□□□□ -0.86
HERC1-210ENST00000560897 RYDENQ9NUL5 291 aaKnown RBP9.65□□□□□ -0.86
HERC1-210ENST00000560897 VANGL2Q9ULK5 521 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 G3BP2Q9UN86 482 aaKnown RBP9.65□□□□□ -0.86
HERC1-210ENST00000560897 CLIC4Q9Y696 253 aa9.65□□□□□ -0.86
HERC1-210ENST00000560897 CSMD2Q7Z408 3487 aa9.65□□□□□ -0.87
HERC1-210ENST00000560897 PDZD2O15018 2839 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 DNHD1Q96M86 4753 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 PRSS44E7EML9 344 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 M0QYV0 167 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 DPM1O60762 260 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 MMP20O60882 483 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 KATNA1O75449 491 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 ADCY5O95622 1261 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 TRUB2O95900 331 aaKnown RBP9.64□□□□□ -0.87
HERC1-210ENST00000560897 TRIM49P0CI25 452 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 TRIM49CP0CI26 452 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 MPSTP25325 297 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 CCNHP51946 323 aaPredicted RBP9.64□□□□□ -0.87
HERC1-210ENST00000560897 CDH4P55283 916 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 MTA1Q13330 715 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 LRRC14Q15048 493 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 RABEP1Q15276 862 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 KLHL40Q2TBA0 621 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 CARD16Q5EG05 197 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 KRT39Q6A163 491 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 SP5Q6BEB4 398 aaPredicted RBP9.64□□□□□ -0.87
HERC1-210ENST00000560897 RETSATQ6NUM9 610 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 PMF1Q6P1K2 205 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 INTS8Q75QN2 995 aaKnown RBP9.64□□□□□ -0.87
HERC1-210ENST00000560897 TP53I13Q8NBR0 393 aaPredicted RBP9.64□□□□□ -0.87
HERC1-210ENST00000560897 OR52K2Q8NGK3 314 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 PDXPQ96GD0 296 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 HSFY1Q96LI6 401 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 LURAP1Q96LR2 239 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 PRMT1Q99873 361 aaKnown RBP9.64□□□□□ -0.87
HERC1-210ENST00000560897 TMEM8AQ9HCN3 771 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 MBNL1Q9NR56 388 aaKnown RBP9.64□□□□□ -0.87
HERC1-210ENST00000560897 KBTBD4Q9NVX7 518 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 DMAC2Q9NW81 257 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 FAM13BQ9NYF5 915 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 LUZP4Q9P127 313 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 RCOR3Q9P2K3 495 aaPredicted RBP9.64□□□□□ -0.87
HERC1-210ENST00000560897 KCND3Q9UK17 655 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 OR51B4Q9Y5P0 310 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 DGKBQ9Y6T7 804 aa9.64□□□□□ -0.87
HERC1-210ENST00000560897 AKAP9Q99996 3911 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 SYNJ2BP-COX16A0A087WUM0 186 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 PIPSLA2A3N6 862 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 ANKUB1A6NFN9 424 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 CACNB4O00305 520 aaPredicted RBP9.63□□□□□ -0.87
HERC1-210ENST00000560897 O00370 1275 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 DNAJB5O75953 348 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 XPAP23025 273 aaPredicted RBP9.63□□□□□ -0.87
HERC1-210ENST00000560897 CCR1P32246 355 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 GPR3P46089 330 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 MAZP56270 477 aaKnown RBP9.63□□□□□ -0.87
HERC1-210ENST00000560897 RNASE9P60153 205 aaKnown RBP9.63□□□□□ -0.87
HERC1-210ENST00000560897 CEBPZQ03701 1054 aaKnown RBP9.63□□□□□ -0.87
HERC1-210ENST00000560897 AUHQ13825 339 aaKnown RBP9.63□□□□□ -0.87
HERC1-210ENST00000560897 MAP7Q14244 749 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 ZNF805Q5CZA5 627 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 LCLAT1Q6UWP7 414 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 IRF2BP1Q8IU81 584 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 APLFQ8IW19 511 aaPredicted RBP9.63□□□□□ -0.87
HERC1-210ENST00000560897 DHX58Q96C10 678 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 AHCYL2Q96HN2 611 aaKnown RBP9.63□□□□□ -0.87
HERC1-210ENST00000560897 PSMB7Q99436 277 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 APOOQ9BUR5 198 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 ACSS2Q9NR19 701 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 ST7Q9NRC1 585 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 COX16Q9P0S2 106 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 HECAQ9UBI9 543 aaPredicted RBP9.63□□□□□ -0.87
HERC1-210ENST00000560897 MOSPD1Q9UJG1 213 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 KIAA1257Q9ULG3 409 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 TBC1D30Q9Y2I9 924 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 ZNF451Q9Y4E5 1061 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 TMEM184BQ9Y519 407 aaPredicted RBP9.63□□□□□ -0.87
HERC1-210ENST00000560897 OR1A2Q9Y585 309 aa9.63□□□□□ -0.87
HERC1-210ENST00000560897 PRRC2CQ9Y520 2896 aaKnown RBP9.62□□□□□ -0.87
HERC1-210ENST00000560897 POLR1CO15160 346 aaPredicted RBP9.62□□□□□ -0.87
HERC1-210ENST00000560897 MAPK13O15264 365 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 CALUO43852 315 aaPredicted RBP9.62□□□□□ -0.87
HERC1-210ENST00000560897 PCCBP05166 539 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 FYNP06241 537 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 KELP23276 732 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 CD1CP29017 333 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 CASP14P31944 242 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 SERPINH1P50454 418 aaKnown RBP9.62□□□□□ -0.87
HERC1-210ENST00000560897 MXI1P50539 228 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 MC2RQ01718 297 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 PPP3CAQ08209 521 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 SEMA5AQ13591 1074 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 TSR1Q2NL82 804 aaKnown RBP9.62□□□□□ -0.87
HERC1-210ENST00000560897 SNAP47Q5SQN1 464 aa9.62□□□□□ -0.87
HERC1-210ENST00000560897 C1orf220Q5T0J3 134 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms