RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	LGMN	Q99538	433 aa		13.8	□□□□□ -0.2
RNF31-223	ENST00000560754	SELENOO	Q9BVL4	669 aa		13.8	□□□□□ -0.2
RNF31-223	ENST00000560754	C1QTNF7	Q9BXJ2	289 aa		13.8	□□□□□ -0.2
RNF31-223	ENST00000560754	SLC13A1	Q9BZW2	595 aa		13.8	□□□□□ -0.2
RNF31-223	ENST00000560754	LHX3	Q9UBR4	397 aa		13.8	□□□□□ -0.2
RNF31-223	ENST00000560754	APOBEC3B	Q9UH17	382 aa	Known RBP	13.8	□□□□□ -0.2
RNF31-223	ENST00000560754	PCDHGA8	Q9Y5G5	932 aa		13.8	□□□□□ -0.2
RNF31-223	ENST00000560754	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	TSPAN11	A1L157	253 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	INSIG1	O15503	277 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	CCP110	O43303	1012 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	TPM2	P07951	284 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	TSHR	P16473	764 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	CSNK1D	P48730	415 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	RPIA	P49247	311 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	BLK	P51451	505 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	COPB1	P53618	953 aa	Known RBP	13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	UCN	P55089	124 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	RHOA	P61586	193 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	CXADR	P78310	365 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	PPARD	Q03181	441 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	C1orf61	Q13536	156 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	GRM3	Q14832	879 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	SYCP1	Q15431	976 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	WSCD2	Q2TBF2	565 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	EFHC2	Q5JST6	749 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	FAXC	Q5TGI0	409 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	SCYL2	Q6P3W7	929 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	VPS36	Q86VN1	386 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	PHACTR4	Q8IZ21	702 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	NETO2	Q8NC67	525 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	CXorf40A	Q8TE69	158 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	HMCES	Q96FZ2	354 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	ATXN7L3B	Q96GX2	97 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	ZNF641	Q96N77	438 aa	Predicted RBP	13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	ERGIC2	Q96RQ1	377 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	EPAS1	Q99814	870 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	AGPAT1	Q99943	283 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	CNPY3	Q9BT09	278 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	LRRC61	Q9BV99	259 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	SUV39H2	Q9H5I1	410 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	LRRC19	Q9H756	370 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	CATSPERB	Q9H7T0	1116 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	THSD1	Q9NS62	852 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	PADI4	Q9UM07	663 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	SATB2	Q9UPW6	733 aa		13.79	□□□□□ -0.2
RNF31-223	ENST00000560754	AHCTF1	Q8WYP5	2266 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	CDRT15L2	A8MXV6	281 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	ERVH48-1	M5A8F1	160 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	NTN3	O00634	580 aa	Predicted RBP	13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	MUSK	O15146	869 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	BUB1B	O60566	1050 aa	Predicted RBP	13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	ANXA6	P08133	673 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	HTR7	P34969	479 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	MLLT3	P42568	568 aa	Predicted RBP	13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	HK3	P52790	923 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	NDST2	P52849	883 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	TMPRSS3	P57727	454 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	ELP6	Q0PNE2	266 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	LRRC14	Q15048	493 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	LRRC73	Q5JTD7	316 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	BROX	Q5VW32	411 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	ACAD10	Q6JQN1	1059 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	RBM44	Q6ZP01	1051 aa	Known RBP	13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	IRF2BP2	Q7Z5L9	587 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	DNAAF5	Q86Y56	855 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	NEK11	Q8NG66	645 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	NAT6	Q93015	286 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	VCPIP1	Q96JH7	1222 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	PDF	Q9HBH1	243 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	DONSON	Q9NYP3	566 aa		13.78	□□□□□ -0.2
RNF31-223	ENST00000560754	CFAP69	A5D8W1	941 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	LGALS16	A8MUM7	142 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754		J3KR12	359 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	CASC3	O15234	703 aa	Known RBP	13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	FGF10	O15520	208 aa	Predicted RBP	13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	KLK10	O43240	276 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	CREB3	O43889	395 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	PRAMEF11	O60813	436 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	RBMS1	P29558	406 aa	Known RBP	13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	RHD	Q02161	417 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	INPP5A	Q14642	412 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	ELOC	Q15369	112 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	ESRP1	Q6NXG1	681 aa	Known RBP	13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	APTX	Q7Z2E3	356 aa	Known RBP	13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	ZNF354C	Q86Y25	554 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	MCOLN2	Q8IZK6	566 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	ZNF843	Q8N446	348 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	FSTL5	Q8N475	847 aa	Predicted RBP	13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	KCNE4	Q8WWG9	221 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	SCG3	Q8WXD2	468 aa	Known RBP	13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	NAF1	Q96HR8	494 aa	Known RBP	13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	SYT11	Q9BT88	431 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	WRAP53	Q9BUR4	548 aa	Known RBP	13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	APOO	Q9BUR5	198 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	CPNE5	Q9HCH3	593 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	PCDH12	Q9NPG4	1184 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	SCN8A	Q9UQD0	1980 aa		13.77	□□□□□ -0.21
RNF31-223	ENST00000560754	ANKRD62	A6NC57	917 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms