RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 DHTKD1Q96HY7 919 aaPredicted RBP16.79■□□□□ 0.28
HERC1-207ENST00000560316 PSMG3-AS1Q96PY0 264 aa16.79■□□□□ 0.28
HERC1-207ENST00000560316 ZYG11BQ9C0D3 744 aa16.79■□□□□ 0.28
HERC1-207ENST00000560316 GDPD2Q9HCC8 539 aa16.79■□□□□ 0.28
HERC1-207ENST00000560316 PLCB1Q9NQ66 1216 aa16.79■□□□□ 0.28
HERC1-207ENST00000560316 KLQ9UEF7 1012 aa16.79■□□□□ 0.28
HERC1-207ENST00000560316 STAP1Q9ULZ2 295 aa16.79■□□□□ 0.28
HERC1-207ENST00000560316 PCDHGC3Q9UN70 934 aa16.79■□□□□ 0.28
HERC1-207ENST00000560316 ZDHHC9Q9Y397 364 aa16.79■□□□□ 0.28
HERC1-207ENST00000560316 OR1A2Q9Y585 309 aa16.79■□□□□ 0.28
HERC1-207ENST00000560316 SDK2Q58EX2 2172 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 FAM170AA1A519 330 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 TMEM110-MUSTN1A8MSY1 372 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.78■□□□□ 0.28
HERC1-207ENST00000560316 SMC2O95347 1197 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 POP4O95707 220 aaKnown RBP16.78■□□□□ 0.28
HERC1-207ENST00000560316 GSRP00390 522 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 CCL4P13236 92 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 SNRPD1P62314 119 aaKnown RBP16.78■□□□□ 0.28
HERC1-207ENST00000560316 APBA1Q02410 837 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 NFATC4Q14934 902 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 LRRC14Q15048 493 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 POLD3Q15054 466 aaPredicted RBP16.78■□□□□ 0.28
HERC1-207ENST00000560316 WSCD2Q2TBF2 565 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 KLHL10Q6JEL2 608 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 TTI2Q6NXR4 508 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 GDPD4Q6W3E5 623 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 FAM26EQ8N5C1 309 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 ARHGEF2Q92974 986 aaKnown RBP16.78■□□□□ 0.28
HERC1-207ENST00000560316 SMARCE1Q969G3 411 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 PGAP3Q96FM1 320 aaPredicted RBP16.78■□□□□ 0.28
HERC1-207ENST00000560316 CRACR2AQ9BSW2 395 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 APOOQ9BUR5 198 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 OSBPL1AQ9BXW6 950 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 RDH14Q9HBH5 336 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 NDFIP2Q9NV92 336 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 LRIT1Q9P2V4 623 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.78■□□□□ 0.28
HERC1-207ENST00000560316 LRP4O75096 1905 aa16.78■□□□□ 0.28
HERC1-207ENST00000560316 BLACEA4D250 179 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 STMND1H3BQB6 276 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 F9P00740 461 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 TIMP2P16035 220 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 HTR1BP28222 390 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 ARSDP51689 593 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 SERINC3Q13530 473 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 STIM1Q13586 685 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 ARHGEF7Q14155 803 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 INPP5AQ14642 412 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 NCAPHQ15003 741 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 MAP9Q49MG5 647 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 TMEM164Q5U3C3 297 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 HIST2H2BCQ6DN03 193 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 OGFOD3Q6PK18 319 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 ENOSF1Q7L5Y1 443 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 TAF8Q7Z7C8 310 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 FMR1NBQ8N0W7 255 aaPredicted RBP16.77■□□□□ 0.28
HERC1-207ENST00000560316 NETO2Q8NC67 525 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 FAM46DQ8NEK8 389 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 SPATA20Q8TB22 786 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 NKD1Q969G9 470 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 PMEPA1Q969W9 287 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 PDXPQ96GD0 296 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 HAPLN3Q96S86 360 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 RBM15Q96T37 977 aaKnown RBP eCLIP16.77■□□□□ 0.28
HERC1-207ENST00000560316 SCAND2PQ9GZW5 306 aaPredicted RBP16.77■□□□□ 0.28
HERC1-207ENST00000560316 ZNF71Q9NQZ8 489 aaPredicted RBP16.77■□□□□ 0.28
HERC1-207ENST00000560316 PAXBP1Q9Y5B6 917 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 MYO9AB2RTY4 2548 aa16.77■□□□□ 0.28
HERC1-207ENST00000560316 LRRK1Q38SD2 2015 aa16.77■□□□□ 0.27
HERC1-207ENST00000560316 CHD5Q8TDI0 1954 aa16.77■□□□□ 0.27
HERC1-207ENST00000560316 B4DGG1 531 aa16.76■□□□□ 0.27
HERC1-207ENST00000560316 TNFP01375 233 aa16.76■□□□□ 0.27
HERC1-207ENST00000560316 LIFP15018 202 aa16.76■□□□□ 0.27
HERC1-207ENST00000560316 PNLIPP16233 465 aa16.76■□□□□ 0.27
HERC1-207ENST00000560316 CCR10P46092 362 aa16.76■□□□□ 0.27
HERC1-207ENST00000560316 ATP1A2P50993 1020 aa16.76■□□□□ 0.27
HERC1-207ENST00000560316 SNX16P57768 344 aa16.76■□□□□ 0.27
HERC1-207ENST00000560316 SLC25A52Q3SY17 297 aa16.76■□□□□ 0.27
HERC1-207ENST00000560316 AMZ1Q400G9 498 aa16.76■□□□□ 0.27
HERC1-207ENST00000560316 ACBD5Q5T8D3 534 aaPredicted RBP16.76■□□□□ 0.27
HERC1-207ENST00000560316 TRIM65Q6PJ69 517 aa16.76■□□□□ 0.27
HERC1-207ENST00000560316 FAM131BQ86XD5 332 aa16.76■□□□□ 0.27
HERC1-207ENST00000560316 RCBTB1Q8NDN9 531 aa16.76■□□□□ 0.27
HERC1-207ENST00000560316 DNAI1Q9UI46 699 aa16.76■□□□□ 0.27
HERC1-207ENST00000560316 TUBD1Q9UJT1 453 aa16.76■□□□□ 0.27
HERC1-207ENST00000560316 ANAPC2Q9UJX6 822 aa16.76■□□□□ 0.27
HERC1-207ENST00000560316 PLAAQ9Y263 795 aa16.76■□□□□ 0.27
HERC1-207ENST00000560316 PCCBP05166 539 aa16.75■□□□□ 0.27
HERC1-207ENST00000560316 SLC9A1P19634 815 aa16.75■□□□□ 0.27
HERC1-207ENST00000560316 KRT9P35527 623 aa16.75■□□□□ 0.27
HERC1-207ENST00000560316 B4GALNT1Q00973 533 aa16.75■□□□□ 0.27
HERC1-207ENST00000560316 HLTFQ14527 1009 aaKnown RBP eCLIP16.75■□□□□ 0.27
HERC1-207ENST00000560316 TMEM52BQ4KMG9 183 aa16.75■□□□□ 0.27
HERC1-207ENST00000560316 C14orf28Q4W4Y0 310 aa16.75■□□□□ 0.27
HERC1-207ENST00000560316 EFHC2Q5JST6 749 aa16.75■□□□□ 0.27
HERC1-207ENST00000560316 ZDHHC17Q8IUH5 632 aa16.75■□□□□ 0.27
HERC1-207ENST00000560316 IL22RA1Q8N6P7 574 aa16.75■□□□□ 0.27
HERC1-207ENST00000560316 NELFBQ8WX92 580 aa16.75■□□□□ 0.27
HERC1-207ENST00000560316 OR1E3Q8WZA6 343 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms