RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 LRRC32Q14392 662 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 GRM3Q14832 879 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 STARD3Q14849 445 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 BRD3Q15059 726 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 SLC1A5Q15758 541 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 MAP9Q49MG5 647 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 FBXO43Q4G163 708 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 MSS51Q4VC12 460 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 DNAJC21Q5F1R6 531 aaKnown RBP10.52□□□□□ -0.73
TPM1-221ENST00000559831 DENND2CQ68D51 928 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 GDPD4Q6W3E5 623 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 CENPUQ71F23 418 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 CACUL1Q86Y37 369 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 ANKMY2Q8IV38 441 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 EIF1ADQ8N9N8 165 aaKnown RBP10.52□□□□□ -0.73
TPM1-221ENST00000559831 IL17RCQ8NAC3 791 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 KCNV2Q8TDN2 545 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 KLHL32Q96NJ5 620 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 ADGRE3Q9BY15 652 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 FRMD8Q9BZ67 464 aaPredicted RBP10.52□□□□□ -0.73
TPM1-221ENST00000559831 FOXP3Q9BZS1 431 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 FOXQ1Q9C009 403 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 SUV39H2Q9H5I1 410 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 TBC1D17Q9HA65 648 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 LMAN1LQ9HAT1 526 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 LTB4R2Q9NPC1 389 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 PRSS16Q9NQE7 514 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 PCDHB9Q9Y5E1 797 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 LOC285095A0A1B0GVY8 99 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 KANSL1LA0AUZ9 987 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 AP3B1O00203 1094 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 KPNA3O00505 521 aaPredicted RBP10.51□□□□□ -0.73
TPM1-221ENST00000559831 TRAFD1O14545 582 aaPredicted RBP10.51□□□□□ -0.73
TPM1-221ENST00000559831 ADAM23O75077 832 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 SOCS5O75159 536 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 PRLP01236 227 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 IL1BP01584 269 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 PRNPP04156 253 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 FGF1P05230 155 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 ATXN1LP0C7T5 689 aaKnown RBP10.51□□□□□ -0.73
TPM1-221ENST00000559831 PIRTP0C851 137 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 CHRM1P11229 460 aaPredicted RBP10.51□□□□□ -0.73
TPM1-221ENST00000559831 MLNP12872 115 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 CTPS1P17812 591 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 COL9A1P20849 921 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 STARD6P59095 220 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 CRADDP78560 199 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 ZXDAP98168 799 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 ENPP2Q13822 863 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 ELAVL3Q14576 367 aaKnown RBP10.51□□□□□ -0.73
TPM1-221ENST00000559831 TJAP1Q5JTD0 557 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 EOGTQ5NDL2 527 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 CERCAMQ5T4B2 595 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 DENND5AQ6IQ26 1287 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 CASC4Q6P4E1 433 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 RANBP10Q6VN20 620 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 Q6ZS52 159 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 CEP128Q6ZU80 1094 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 DSG4Q86SJ6 1040 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 MMAAQ8IVH4 418 aaKnown RBP10.51□□□□□ -0.73
TPM1-221ENST00000559831 ZBED8Q8IZ13 594 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 PIP4K2CQ8TBX8 421 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 AENQ8WTP8 325 aaKnown RBP10.51□□□□□ -0.73
TPM1-221ENST00000559831 CFAP36Q96G28 342 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 ZNF641Q96N77 438 aaPredicted RBP10.51□□□□□ -0.73
TPM1-221ENST00000559831 TRIB3Q96RU7 358 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 FAM129BQ96TA1 746 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 GABRG3Q99928 467 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 OSBPL1AQ9BXW6 950 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 ARGLU1Q9NWB6 273 aaPredicted RBP10.51□□□□□ -0.73
TPM1-221ENST00000559831 SYBUQ9NX95 663 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 BFARQ9NZS9 450 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 CHMP2BQ9UQN3 213 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 MTF2Q9Y483 593 aaPredicted RBP10.51□□□□□ -0.73
TPM1-221ENST00000559831 ARIH1Q9Y4X5 557 aaPredicted RBP10.51□□□□□ -0.73
TPM1-221ENST00000559831 MAD1L1Q9Y6D9 718 aa10.51□□□□□ -0.73
TPM1-221ENST00000559831 SDR42E2A6NKP2 422 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 FAM170BA6NMN3 283 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 C1QTNF3-AMACRE9PGA6 284 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 ALOX15BO15296 676 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 EIF3HO15372 352 aaKnown RBP eCLIP10.5□□□□□ -0.73
TPM1-221ENST00000559831 HTRA2O43464 458 aaPredicted RBP10.5□□□□□ -0.73
TPM1-221ENST00000559831 FZD6O60353 706 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 RNASEH1O60930 286 aaKnown RBP10.5□□□□□ -0.73
TPM1-221ENST00000559831 EPOP01588 193 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 SLC4A1P02730 911 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 PRKCGP05129 697 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 CHRNB1P11230 501 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 XPAP23025 273 aaPredicted RBP10.5□□□□□ -0.73
TPM1-221ENST00000559831 SLC8A1P32418 973 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 ELK3P41970 407 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 MAGEA4P43358 317 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 NPY2RP49146 381 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 CAMK2GQ13555 558 aaPredicted RBP10.5□□□□□ -0.73
TPM1-221ENST00000559831 POU6F1Q14863 301 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 SLMAPQ14BN4 828 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 FASTKD3Q14CZ7 662 aaKnown RBP10.5□□□□□ -0.73
TPM1-221ENST00000559831 QPCTQ16769 361 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 CCDC38Q502W7 563 aa10.5□□□□□ -0.73
TPM1-221ENST00000559831 ZNF805Q5CZA5 627 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms