RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 SUPT7LO94864 414 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 TMCC1O94876 653 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 PSMG1O95456 288 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 ERVK-10P10266 1014 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 TMED10P49755 219 aaKnown RBP10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 MLLT6P55198 1093 aaPredicted RBP10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 IL1RL1Q01638 556 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 UBXN2BQ14CS0 331 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 PCID2Q5JVF3 399 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 MYO1HQ8N1T3 1032 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 ZSCAN18Q8TBC5 510 aaPredicted RBP10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 KBTBD7Q8WVZ9 684 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 ZNF75CPQ92670 426 aaPredicted RBP10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 ZCCHC2Q9C0B9 1178 aaKnown RBP10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 SYTL2Q9HCH5 934 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 ZMYM5Q9UJ78 669 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 PCDHGC4Q9Y5F7 938 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 FCHO1O14526 889 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 KRT36O76013 467 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 CTSAP10619 480 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 TCN1P20061 433 aaPredicted RBP10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 BGNP21810 368 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 IL1R2P27930 398 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 GP5P40197 560 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 AQP5P55064 265 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 LRRTM3Q86VH5 581 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 TMPRSS6Q8IU80 811 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 BPIFB1Q8TDL5 484 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 DDX1Q92499 740 aaKnown RBP10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 TMEM159Q96B96 161 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 HAPLN3Q96S86 360 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 ING2Q9H160 280 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 CAAP1Q9H8G2 361 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 SAR1AQ9NR31 198 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 BACE2Q9Y5Z0 518 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 CHADO15335 359 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 PIAS1O75925 651 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 HOXD8P13378 290 aaPredicted RBP10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 TCF4P15884 667 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 SCNN1AP37088 669 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 SEC13P55735 322 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 PDPK2PQ6A1A2 396 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 TBC1D19Q8N5T2 526 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 FITM2Q8N6M3 262 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 TCP10LQ8TDR4 215 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 CASD1Q96PB1 797 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 CYP4F12Q9HCS2 524 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 PNPLA8Q9NP80 782 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 AASDHPPTQ9NRN7 309 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 RNF112Q9ULX5 631 aa10.74□□□□□ -0.69
CARMIL3-202ENST00000559694 GNGT2O14610 69 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 LIN7AO14910 233 aaPredicted RBP10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 FKBP6O75344 327 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 MTA2O94776 668 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 MYO1DO94832 1006 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 POU4F1Q01851 419 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 BNIP1Q12981 228 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 DDX39BQ13838 428 aaKnown RBP10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 PPP1R15BQ5SWA1 713 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 RNF220Q5VTB9 566 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 SLC39A11Q8N1S5 342 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 ZCCHC9Q8N567 271 aaKnown RBP10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 TTC9BQ8N6N2 239 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 CELF5Q8N6W0 485 aaKnown RBP10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 GDPD5Q8WTR4 605 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 SKA1Q96BD8 255 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 EML4Q9HC35 981 aaKnown RBP10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 BAG5Q9UL15 447 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 FCF1Q9Y324 198 aaKnown RBP10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 STARD13Q9Y3M8 1113 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 RAD54BQ9Y620 910 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 IFRD1O00458 451 aaPredicted RBP10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 KDM1AO60341 852 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 AVILO75366 819 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 ADRA1DP25100 572 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 FMO4P31512 558 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 GPR1P46091 355 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 MAPKAPK2P49137 400 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 OGDHQ02218 1023 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 DSC2Q02487 901 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 LRRC39Q96DD0 335 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 PIWIL1Q96J94 861 aaKnown RBP10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 KLHL4Q9C0H6 718 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 SLC39A8Q9C0K1 460 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 STN1Q9H668 368 aaKnown RBP10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 TMLHEQ9NVH6 421 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 ZNF212Q9UDV6 495 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 SLC24A2Q9UI40 661 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 LNPEPQ9UIQ6 1025 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 MRPS17Q9Y2R5 130 aaKnown RBP10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 TGM5O43548 720 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 HTR7P34969 479 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 SERPINB8P50452 374 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 ERVK-21P61565 698 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 CLDN10P78369 228 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 PLCL1Q15111 1095 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 SPANXN3Q5MJ09 141 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 TEDDM1Q5T9Z0 273 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 RAET1GQ6H3X3 334 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 FAM13CQ8NE31 585 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms