RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 BUB1BO60566 1050 aaPredicted RBP12.71□□□□□ -0.37
LRRC28-214ENST00000559433 MMP20O60882 483 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 SDC3O75056 442 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 KRT7P08729 469 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 C1QTNF9P0C862 333 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 ITIH2P19823 946 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 RENBPP51606 427 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 SUOXP51687 545 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 TAS2R40P59535 323 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 SLC10A7Q0GE19 358 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 ELP6Q0PNE2 266 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 BNIP3Q12983 259 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 MMRN1Q13201 1228 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 TBX2Q13207 712 aaPredicted RBP12.71□□□□□ -0.37
LRRC28-214ENST00000559433 PDAP1Q13442 181 aaKnown RBP12.71□□□□□ -0.37
LRRC28-214ENST00000559433 DPYSL3Q14195 570 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 MESDQ14696 234 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 ZFYVE27Q5T4F4 411 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 ERAP2Q6P179 960 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 BRAT1Q6PJG6 821 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 SLC22A18ASQ8N1D0 253 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 GALNT15Q8N3T1 639 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 DENND6BQ8NEG7 585 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 SLC35G2Q8TBE7 412 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 FAM71BQ8TC56 605 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 ASB12Q8WXK4 309 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 CNDP2Q96KP4 475 aaKnown RBP12.71□□□□□ -0.37
LRRC28-214ENST00000559433 BMFQ96LC9 184 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 ZNF599Q96NL3 588 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 LENG8Q96PV6 779 aaPredicted RBP12.71□□□□□ -0.37
LRRC28-214ENST00000559433 KLF6Q99612 283 aaPredicted RBP12.71□□□□□ -0.37
LRRC28-214ENST00000559433 C1QTNF7Q9BXJ2 289 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 PCDH12Q9NPG4 1184 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 TOR4AQ9NXH8 423 aa12.71□□□□□ -0.37
LRRC28-214ENST00000559433 AKAP13Q12802 2813 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 ENC1O14682 589 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 MUSKO15146 869 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 MFSD11O43934 449 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 MAFKO60675 156 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 TM7SF2O76062 418 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 CDK4P11802 303 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 IL4RP24394 825 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 MAN1A1P33908 653 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 RABIFP47224 123 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 SCNN1BP51168 640 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 ARSEP51690 589 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 AP1S1P61966 158 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 BCL2L1Q07817 233 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 NSUN2Q08J23 767 aaKnown RBP eCLIP12.7□□□□□ -0.38
LRRC28-214ENST00000559433 PDK2Q15119 407 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 UGP2Q16851 508 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 TMEM52BQ4KMG9 183 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 ATP13A4Q4VNC1 1196 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 MAP7D3Q8IWC1 876 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 RHOT2Q8IXI1 618 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 BBS5Q8N3I7 341 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 NSMCE1Q8WV22 266 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 PSKH2Q96QS6 385 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 ZNF670Q9BS34 389 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 ATP8A1Q9Y2Q0 1164 aa12.7□□□□□ -0.38
LRRC28-214ENST00000559433 ARID1BQ8NFD5 2236 aaPredicted RBP12.69□□□□□ -0.38
LRRC28-214ENST00000559433 FRYQ5TBA9 3013 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 NEMP2A6NFY4 417 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 PEX11BO96011 259 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 PRKCGP05129 697 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 ALPPL2P10696 532 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 IGFALSP35858 605 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 HSPA9P38646 679 aaKnown RBP12.69□□□□□ -0.38
LRRC28-214ENST00000559433 MMP12P39900 470 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 ARHGAP25P42331 645 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 PDE1CQ14123 709 aaPredicted RBP12.69□□□□□ -0.38
LRRC28-214ENST00000559433 ANKRD20A8PQ5CZ79 823 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 NCBP2-AS2Q69YL0 99 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 KDM7AQ6ZMT4 941 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 KANSL1Q7Z3B3 1105 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 ZSWIM9Q86XI8 627 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 PCDH19Q8TAB3 1148 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 RFFLQ8WZ73 363 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 SCUBE2Q9NQ36 999 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 GPR27Q9NS67 375 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 DNAJC28Q9NX36 388 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 COQ6Q9Y2Z9 468 aa12.69□□□□□ -0.38
LRRC28-214ENST00000559433 PLXNB3Q9ULL4 1909 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 SPTY2D1-AS1A0A0U1RR47 76 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.68□□□□□ -0.38
LRRC28-214ENST00000559433 TTC24A2A3L6 582 aaPredicted RBP12.68□□□□□ -0.38
LRRC28-214ENST00000559433 FAM221BA6H8Z2 402 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 MTA2O94776 668 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 C1SP09871 688 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 C6P13671 934 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 DGKAP23743 735 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 GARSP41250 739 aaKnown RBP12.68□□□□□ -0.38
LRRC28-214ENST00000559433 MMP13P45452 471 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 SEMG2Q02383 582 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 GALNT2Q10471 571 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 PTK2BQ14289 1009 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 FZD2Q14332 565 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 PAFAH1B3Q15102 231 aaKnown RBP12.68□□□□□ -0.38
LRRC28-214ENST00000559433 IRF4Q15306 451 aa12.68□□□□□ -0.38
LRRC28-214ENST00000559433 ZNF542PQ5EBM4 170 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms