RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CXorf51AA0A1B0GTR3 108 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 EIF3CLB5ME19 914 aaKnown RBP12.63□□□□□ -0.39
SMAD3-208ENST00000558827 YKT6O15498 198 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 AKR1B10O60218 316 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 LZTS3O60299 673 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-208ENST00000558827 PIAS2O75928 621 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 TNNT1P13805 278 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 HCAR3P49019 387 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 DAB2P98082 770 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 IL10RBQ08334 325 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 MESDQ14696 234 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 LBRQ14739 615 aaKnown RBP12.63□□□□□ -0.39
SMAD3-208ENST00000558827 PTPRRQ15256 657 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 UGP2Q16851 508 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 KYAT3Q6YP21 454 aaKnown RBP12.63□□□□□ -0.39
SMAD3-208ENST00000558827 TMPRSS7Q7RTY8 843 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 PSTKQ8IV42 348 aaKnown RBP12.63□□□□□ -0.39
SMAD3-208ENST00000558827 VSTM4Q8IW00 320 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 RBFAQ8N0V3 343 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 PGBD5Q8N414 524 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 PDCD6IPQ8WUM4 868 aaKnown RBP12.63□□□□□ -0.39
SMAD3-208ENST00000558827 EIF3CQ99613 913 aaKnown RBP12.63□□□□□ -0.39
SMAD3-208ENST00000558827 CPEB1Q9BZB8 566 aaKnown RBP12.63□□□□□ -0.39
SMAD3-208ENST00000558827 DONSONQ9NYP3 566 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 DKK3Q9UBP4 350 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 NENFQ9UMX5 172 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 PCDHGC4Q9Y5F7 938 aa12.63□□□□□ -0.39
SMAD3-208ENST00000558827 A0A0U1RQS6 177 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 TRABD2BA6NFA1 517 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 TAF4O00268 1085 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 RIOK3O14730 519 aaKnown RBP12.62□□□□□ -0.39
SMAD3-208ENST00000558827 RFPL3O75679 317 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 PCCBP05166 539 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 H2AFZP0C0S5 128 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 C6P13671 934 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 JUNDP17535 347 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 IL4RP24394 825 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 RABIFP47224 123 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 ACADVLP49748 655 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 LIG3P49916 1009 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 THOP1P52888 689 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 BCL2L1Q07817 233 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 EIF2B5Q13144 721 aaKnown RBP12.62□□□□□ -0.39
SMAD3-208ENST00000558827 ZNF235Q14590 738 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 ACAP1Q15027 740 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 IRF4Q15306 451 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 HADHQ16836 314 aaKnown RBP12.62□□□□□ -0.39
SMAD3-208ENST00000558827 TSR1Q2NL82 804 aaKnown RBP12.62□□□□□ -0.39
SMAD3-208ENST00000558827 WSCD2Q2TBF2 565 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 TMEM52BQ4KMG9 183 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 DENND2CQ68D51 928 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 H2AFVQ71UI9 128 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 RD3Q7Z3Z2 195 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 TP53I13Q8NBR0 393 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-208ENST00000558827 KCTD6Q8NC69 237 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 LMX1AQ8TE12 382 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 CTNNBL1Q8WYA6 563 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-208ENST00000558827 CENPTQ96BT3 561 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 IQCDQ96DY2 449 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 SMIM14Q96QK8 99 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 ATP13A3Q9H7F0 1226 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 ZNHIT6Q9NWK9 470 aaKnown RBP12.62□□□□□ -0.39
SMAD3-208ENST00000558827 SEPT3Q9UH03 358 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 PNMA8BQ9ULN7 279 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-208ENST00000558827 HYOU1Q9Y4L1 999 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 APC2O95996 2303 aa12.62□□□□□ -0.39
SMAD3-208ENST00000558827 ACACAQ13085 2346 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 ASXL3Q9C0F0 2248 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 SPTY2D1-AS1A0A0U1RR47 76 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 FAM221BA6H8Z2 402 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 MFSD11O43934 449 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 MAFKO60675 156 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 PROSCO94903 275 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 DKK1O94907 266 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 PEX11BO96011 259 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 CELA2BP08218 269 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-208ENST00000558827 TPM1P09493 284 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 GIMD1P0DJR0 217 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 JUPP14923 745 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 CKMT2P17540 419 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 SERPINA4P29622 427 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 HNRNPH3P31942 346 aaKnown RBP12.61□□□□□ -0.39
SMAD3-208ENST00000558827 PFN3P60673 137 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 CYP4F3Q08477 520 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 ITKQ08881 620 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 DPYSL3Q14195 570 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 SLC18A3Q16572 532 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 ASTE1Q2TB18 679 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-208ENST00000558827 DEFB133Q30KQ1 61 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 PROX2Q3B8N5 592 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 FAXCQ5TGI0 409 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 TMCO4Q5TGY1 634 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 ERAP2Q6P179 960 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 ATPAF2Q8N5M1 289 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 LZTR1Q8N653 840 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 NIPA2Q8N8Q9 360 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 KDF1Q8NAX2 398 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-208ENST00000558827 PLA2G15Q8NCC3 412 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 PCDH19Q8TAB3 1148 aa12.61□□□□□ -0.39
SMAD3-208ENST00000558827 TEKT4Q8WW24 435 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms