RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 COG8Q96MW5 612 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 CSPG4P5Q96PW8 444 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 VPS35Q96QK1 796 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 RBBP8Q99708 897 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 TRMOQ9BU70 441 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 TDRD1Q9BXT4 1180 aaKnown RBP5.56□□□□□ -1.52
GABPB1-207ENST00000558335 GON7Q9BXV9 100 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 C6orf62Q9GZU0 229 aaPredicted RBP5.56□□□□□ -1.52
GABPB1-207ENST00000558335 PDZD7Q9H5P4 517 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 SMYD3Q9H7B4 428 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 UCK1Q9HA47 277 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 FANCFQ9NPI8 374 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 XPNPEP3Q9NQH7 507 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 FBXO6Q9NRD1 293 aaPredicted RBP5.56□□□□□ -1.52
GABPB1-207ENST00000558335 SLC38A7Q9NVC3 462 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 KANSL3Q9P2N6 904 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 SAE1Q9UBE0 346 aaPredicted RBP5.56□□□□□ -1.52
GABPB1-207ENST00000558335 COPG2Q9UBF2 871 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 SUCOQ9UBS9 1254 aaKnown RBP5.56□□□□□ -1.52
GABPB1-207ENST00000558335 CYTH4Q9UIA0 394 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 NUP50Q9UKX7 468 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 SNX7Q9UNH6 387 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 PSMD13Q9UNM6 376 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 PLA2G4CQ9UP65 541 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 WBP11Q9Y2W2 641 aaKnown RBP5.56□□□□□ -1.52
GABPB1-207ENST00000558335 RAP2CQ9Y3L5 183 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 PTPRFP10586 1907 aa5.56□□□□□ -1.52
GABPB1-207ENST00000558335 BRCA1P38398 1863 aaKnown RBP5.56□□□□□ -1.52
GABPB1-207ENST00000558335 DNAJC25-GNG10A0A024R161 153 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 TCRBV7S3A2A0A539 114 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 SOWAHBA6NEL2 793 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 C9IYK1 514 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 RNF103O00237 685 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 EEF2KO00418 725 aaKnown RBP5.55□□□□□ -1.52
GABPB1-207ENST00000558335 POLR1CO15160 346 aaPredicted RBP5.55□□□□□ -1.52
GABPB1-207ENST00000558335 SHOXO15266 292 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 HDAC3O15379 428 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 DENRO43583 198 aaKnown RBP5.55□□□□□ -1.52
GABPB1-207ENST00000558335 NPHS1O60500 1241 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 ICMTO60725 284 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 FGF18O76093 207 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 AP2A1O95782 977 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 CALCAP01258 141 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 IFNA14P01570 189 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 PROCP04070 461 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 CD48P09326 243 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 COX4I1P13073 169 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 PCSK2P16519 638 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 GM2AP17900 193 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 NCF2P19878 526 aaPredicted RBP5.55□□□□□ -1.52
GABPB1-207ENST00000558335 ITGAXP20702 1163 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 WARSP23381 471 aaKnown RBP5.55□□□□□ -1.52
GABPB1-207ENST00000558335 VAMP1P23763 118 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 GRIK1P39086 918 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 SLC26A3P40879 764 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 MAGEA12P43365 314 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 LHX1P48742 406 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 TAF6P49848 677 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 RPL14P50914 215 aaKnown RBP5.55□□□□□ -1.52
GABPB1-207ENST00000558335 TKTL1P51854 596 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 CHN2P52757 468 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 SLC12A2P55011 1212 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 NR1H2P55055 460 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 WNT7BP56706 349 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 POLR2GP62487 172 aaKnown RBP eCLIP5.55□□□□□ -1.52
GABPB1-207ENST00000558335 MRPS5P82675 430 aaKnown RBP5.55□□□□□ -1.52
GABPB1-207ENST00000558335 SMARCB1Q12824 385 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 CDH17Q12864 832 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 ART3Q13508 389 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 SLC12A1Q13621 1099 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 STK11Q15831 433 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 SLC10A6Q3KNW5 377 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 MMEL1Q495T6 779 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 CCDC58Q4VC31 144 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 FBXO47Q5MNV8 452 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 LIPMQ5VYY2 423 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 SEL1L3Q68CR1 1132 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 TIGD7Q6NT04 549 aaPredicted RBP5.55□□□□□ -1.52
GABPB1-207ENST00000558335 PGM2L1Q6PCE3 622 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 EPGNQ6UW88 154 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 UNC5DQ6UXZ4 953 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 GADL1Q6ZQY3 521 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 CYP4V2Q6ZWL3 525 aaPredicted RBP5.55□□□□□ -1.52
GABPB1-207ENST00000558335 BTN2A1Q7KYR7 527 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 CATSPER4Q7RTX7 472 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 PIWIL4Q7Z3Z4 852 aaKnown RBP5.55□□□□□ -1.52
GABPB1-207ENST00000558335 AKAP14Q86UN6 197 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 STK32CQ86UX6 486 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 LRRTM3Q86VH5 581 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 PDSS2Q86YH6 399 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 SLC22A9Q8IVM8 553 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 NKAIN4Q8IVV8 208 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 CCDC28AQ8IWP9 274 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 SULF1Q8IWU6 871 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 KIAA0319LQ8IZA0 1049 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 SCML4Q8N228 414 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 LRRC71Q8N4P6 559 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 DNAAF3Q8N9W5 541 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 PCYOX1LQ8NBM8 494 aa5.55□□□□□ -1.52
GABPB1-207ENST00000558335 OR6B3Q8NGW1 331 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms