RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 COL6A6A6NMZ7 2263 aa6.38□□□□□ -1.39
RTF1-204ENST00000558117 NF1P21359 2839 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 CACNA1EQ15878 2313 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 KANSL1LA0AUZ9 987 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 A8MVJ9 347 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 HIDE1A8MVS5 230 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 TISP43B9A030 160 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 F5H6K3 240 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 EYA2O00167 538 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 PODXLO00592 558 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 CCNT2O60583 730 aaKnown RBP6.37□□□□□ -1.39
RTF1-204ENST00000558117 PLA2G6O60733 806 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 CBFA2T3O75081 653 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 CHRM5P08912 532 aaPredicted RBP6.37□□□□□ -1.39
RTF1-204ENST00000558117 TMEM225BP0DP42 221 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 CYP2D6P10635 497 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 CEACAM1P13688 526 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 APEHP13798 732 aaKnown RBP6.37□□□□□ -1.39
RTF1-204ENST00000558117 EGR1P18146 543 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 ADORA1P30542 326 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 PBX1P40424 430 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 MAGEA9P43362 315 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 SIM2Q14190 667 aaPredicted RBP6.37□□□□□ -1.39
RTF1-204ENST00000558117 DHX8Q14562 1220 aaKnown RBP6.37□□□□□ -1.39
RTF1-204ENST00000558117 ACOX1Q15067 660 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 SLC5A9Q2M3M2 681 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 DGKKQ5KSL6 1271 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 NME8Q8N427 588 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 ACRBPQ8NEB7 543 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 ABHD5Q8WTS1 349 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 CLDN23Q96B33 292 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 EIF2AQ9BY44 585 aaKnown RBP6.37□□□□□ -1.39
RTF1-204ENST00000558117 NRIP3Q9NQ35 241 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 NAV3Q8IVL0 2385 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 RALGAPA1Q6GYQ0 2036 aa6.37□□□□□ -1.39
RTF1-204ENST00000558117 CCDC189A1A4V9 331 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 PRRT4C9JH25 899 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 IFRD1O00458 451 aaPredicted RBP6.36□□□□□ -1.39
RTF1-204ENST00000558117 N4BP1O75113 896 aaKnown RBP6.36□□□□□ -1.39
RTF1-204ENST00000558117 BAG3O95817 575 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 IDEP14735 1019 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 CSRP1P21291 193 aaKnown RBP6.36□□□□□ -1.39
RTF1-204ENST00000558117 ADRA1DP25100 572 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 EPHB2P29323 1055 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 THPOP40225 353 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 MAPKAPK3Q16644 382 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 PLPP4Q5VZY2 271 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 FBXO38Q6PIJ6 1188 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 TOGARAM2Q6ZUX3 1019 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 RASGRP2Q7LDG7 609 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.36□□□□□ -1.39
RTF1-204ENST00000558117 ADGRA1Q86SQ6 560 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 CPXCR1Q8N123 301 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 AFG1LQ8WV93 481 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 APBB2Q92870 758 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 VPS50Q96JG6 964 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 RITA1Q96K30 269 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 CCDC17Q96LX7 622 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 WDR24Q96S15 920 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 BICC1Q9H694 974 aaKnown RBP6.36□□□□□ -1.39
RTF1-204ENST00000558117 RAVER2Q9HCJ3 691 aaKnown RBP6.36□□□□□ -1.39
RTF1-204ENST00000558117 TMEM8AQ9HCN3 771 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 PNMA2Q9UL42 364 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 ITPR2Q14571 2701 aa6.36□□□□□ -1.39
RTF1-204ENST00000558117 USP9YO00507 2555 aaPredicted RBP6.35□□□□□ -1.39
RTF1-204ENST00000558117 RAD50Q92878 1312 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 OR2W5A6NFC9 320 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 CGB1A6NKQ9 187 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 ZSCAN9O15535 394 aaPredicted RBP6.35□□□□□ -1.39
RTF1-204ENST00000558117 MT-CO3P00414 261 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 CELA2AP08217 269 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 MPGP29372 298 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 SLC5A2P31639 672 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 PPM1AP35813 382 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 GABPAQ06546 454 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 SRSF5Q13243 272 aaKnown RBP6.35□□□□□ -1.39
RTF1-204ENST00000558117 ATP1A4Q13733 1029 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 NONOQ15233 471 aaKnown RBP eCLIP6.35□□□□□ -1.39
RTF1-204ENST00000558117 PTPN14Q15678 1187 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 FAM187BQ17R55 369 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 KRTAP21-3Q3LHN1 58 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 FAM83BQ5T0W9 1011 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 ZNF66Q6ZN08 573 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 SERINC5Q86VE9 423 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 LINC01465Q8N7H1 131 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 PNPLA1Q8N8W4 532 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 ADAMTS18Q8TE60 1221 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 HS6ST2Q96MM7 605 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 KLHL5Q96PQ7 755 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 MYADMQ96S97 322 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 SLF1Q9BQI6 1058 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 STK33Q9BYT3 514 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 ARRDC1-AS1Q9H2J1 176 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 SAP30LQ9HAJ7 183 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 C9orf78Q9NZ63 289 aaPredicted RBP6.35□□□□□ -1.39
RTF1-204ENST00000558117 RAI14Q9P0K7 980 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 SLC39A10Q9ULF5 831 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 ATMQ13315 3056 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 SHROOM3Q8TF72 1996 aa6.35□□□□□ -1.39
RTF1-204ENST00000558117 PLXNA4Q9HCM2 1894 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms